Sylvia atricapilla (blackcap): 136375679
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Entry
136375679 CDS
T10263
Symbol
MRE11
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03440
Homologous recombination
sati03450
Non-homologous end-joining
sati04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136375679 (MRE11)
03450 Non-homologous end-joining
136375679 (MRE11)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
136375679 (MRE11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sati03032
]
136375679 (MRE11)
03400 DNA repair and recombination proteins [BR:
sati03400
]
136375679 (MRE11)
DNA replication proteins [BR:
sati03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
136375679 (MRE11)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
136375679 (MRE11)
BRCA1-C complex
136375679 (MRE11)
NHEJ (non-homologous end-joining)
MRX complex
136375679 (MRE11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
136375679
NCBI-ProteinID:
XP_066197428
LinkDB
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Position
2:complement(36281397..36301290)
Genome browser
AA seq
701 aa
AA seq
DB search
MSAFHSHDGEDTFKILVATDIHLGYLEKDPVRGNDTFVTFNEILDHAQKNEVDFVLLGGD
LFHDNKPSRKTIHSCLESLRKYCMGDRPVQFEILSDQAVNFQNSKFPWVNYQDENLNISI
PVFSIHGNHDDPTGADALCALDILSCAGLLNHFGRSTSVEKIDISPILLRKGRTKIALYG
LGAIPDERLYRMFVNKQVTMLRPKEDEDSWFNLFVLHQNRSKHGGTNYIPEQFLDDFINL
VVWGHEHECKIAPFQNEQQRFYISQPGSSVVTSLSPGEAVKKHIGLLHVKGKKMKMEKIA
LETVRTFHIEDIVLADHPDLFNPDNPNVTQAIQAFCMEKVELMLDTAERERLGNPRQPEK
PIIRLRVDYAGGFEPFSVHRFSQKYMHRVANPKDIIHFFRHREQKEKKGIDINFGKVVSR
PAEGMTLRVEDLVKQYFQTAEKKVQLSLLTERAMGEAVQEFVDKEEKDAIEELVKFQLKK
TQGFLKERRTDAEEEKIDEEVRKFRESRKKNTEEEDEEFREAMIRARANRSEDDVLVAAT
NDEDAMDVEEIGTSDGLSSTLSRGRGRARGRARGARGQNSTARGSSRRGRGATRQESASG
SRSYKPVSVPGKNMSTIDAFMSSKTDHSLSSFQSYSEDILDSDSDAEDTSFVPPSSKVNQ
RLPRVSSVSKRGSQSQASRGVDFESDEDDPFMSPATSRRTK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttccactcacacgatggtgaagatacctttaaaatactcgttgctactgat
attcatcttggctatttggagaaggatccagtgcgtggaaatgacacatttgtaactttt
aatgaaattctggaccacgctcagaaaaatgaagtggactttgttttgttaggtggggac
ctttttcacgacaacaaaccctccagaaaaacaatacactcttgtttggagtcactaaga
aaatactgcatgggtgatcgtcctgttcagtttgaaattttgagtgatcaggcagttaat
tttcaaaacagcaagtttccttgggtgaattatcaggatgaaaatctcaacatttctatc
ccagtttttagtattcatggcaatcatgatgatcccacaggggcagatgcactgtgtgca
ttggatattttaagctgtgcaggactgctgaatcactttgggcgttcaacttccgtggag
aaaatagatattagtcccattttattgcgtaaaggcagaacaaaaattgctctgtatggc
ttgggagctattcccgatgagaggttgtatcgtatgtttgtcaataagcaagtaaccatg
ctgagaccaaaagaagatgaagatagttggtttaacttgtttgtgcttcatcaaaatagg
agcaaacatggaggtaccaactacatcccggagcagtttttagatgattttattaatctt
gttgtgtggggtcatgaacatgaatgcaaaatagctccattccaaaatgagcagcaacgt
ttctacatctctcagccaggaagttcagtggtgacatctctgtcccctggagaagctgtg
aagaaacacattggtttgctgcatgttaaagggaaaaaaatgaaaatggagaagattgct
ctagagacagtgcgaactttccatatagaggatattgttctagctgatcatccagatctt
tttaatcctgacaatcctaatgttactcaggcaatacaggcattctgcatggaaaaggtg
gaattgatgctggacactgcagaaagagaacgcttgggaaatccccgccagccagagaag
ccgatcataagattaagagttgattatgcaggtggctttgaaccattcagtgttcatcgt
ttcagccagaagtacatgcacagggtggctaacccgaaagacatcatacactttttcagg
catcgtgaacaaaaggagaaaaaaggcattgatattaattttggaaaagtggttagcaga
cctgctgaaggaatgacactgagggtggaagatcttgtaaagcagtatttccagacagca
gagaagaaagtacagctttcacttctaactgaaagagctatgggagaagcagtgcaagag
tttgtggacaaagaggaaaaagatgccatagaagagctggtgaaatttcaactaaaaaaa
actcaggggtttctcaaggagcgtcgcactgatgcagaggaagaaaaaatagatgaggag
gtgcgaaaattcagagaaagtagaaaaaagaataccgaagaagaagatgaggaattccgt
gaggcaatgatcagggccagagccaaccggtctgaggatgatgtcctggttgcagccacc
aatgatgaagatgccatggatgtggaggagataggcactagtgatggcctttcttcaaca
ctgagccgaggacggggtcgggcaagaggcagggcaagaggtgcaagaggacagaattca
acagcaagaggttcatctcgaagaggaagaggagccactaggcaagagtcagcttctggc
agcagatcctacaagcctgtatctgtgcctggcaagaacatgtctacaatagatgccttt
atgtcttcgaaaacagatcactctttaagttcgttccagtcttactctgaggatatttta
gattctgattctgatgcagaagatacttcttttgttcctccttcttccaaagtaaatcaa
aggttgccaagagtatcttcagttagtaaaagaggctcacaaagccaagcatctagagga
gttgattttgagtcagatgaggatgatccattcatgagccctgcaacgtcaagaagaact
aagtga
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