Staphylococcus aureus 502A: CH52_09405
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Entry
CH52_09405 CDS
T03491
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
saud
Staphylococcus aureus 502A
Pathway
saud03030
DNA replication
saud03410
Base excision repair
saud03420
Nucleotide excision repair
saud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH52_09405 (ligA)
03410 Base excision repair
CH52_09405 (ligA)
03420 Nucleotide excision repair
CH52_09405 (ligA)
03430 Mismatch repair
CH52_09405 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saud03032
]
CH52_09405 (ligA)
03400 DNA repair and recombination proteins [BR:
saud03400
]
CH52_09405 (ligA)
Enzymes [BR:
saud01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CH52_09405 (ligA)
DNA replication proteins [BR:
saud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CH52_09405 (ligA)
DNA repair and recombination proteins [BR:
saud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CH52_09405 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH52_09405 (ligA)
MMR (mismatch excision repair)
DNA ligase
CH52_09405 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CH52_09405 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
Zn_ribbon_NUD
RNA_pol_A_CTD
PTCB-BRCT
HHH
zf-IS66
DUF7575
Motif
Other DBs
NCBI-ProteinID:
AHM70503
UniProt:
A0A3A2IMS6
LinkDB
All DBs
Position
1928647..1930650
Genome browser
AA seq
667 aa
AA seq
DB search
MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTV
RVGGEAQASFKKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSL
KYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNE
EKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELD
KLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSP
RWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHDR
DIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALRCI
NPKCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDRM
GQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVE
IHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLTG
KLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQFVD
KQNELNS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttatcgtctcgtgtgaacgagttacatgatttattaaatcaatacagttat
gaatactatgtagaggataatccatctgtaccagatagtgaatatgacaaattacttcat
gaactgattaaaatagaagaggagcatcctgagtataagactgtagattctccaacagtt
agagttggcggtgaagcccaagcctctttcaaaaaagtcaaccatgacacgccaatgtta
agtttagggaatgcatttaatgaggatgatttgagaaaattcgaccaacgcatacgtgaa
caaattggcaacgttgaatatatgtgcgaattaaaaattgatggcttagcagtatcattg
aaatatgttgatggatacttcgttcaaggtttaacacgtggtgatggaacaacaggtgaa
gatattaccgaaaatttaaaaacaattcatgcgatacctttgaaaatgaaagaaccatta
aatgtagaagttcgtggtgaagcatatatgccgagacgttcatttttacgattaaatgaa
gaaaaagaaaaaaatgatgagcagttatttgcaaatccaagaaacgctgctgcgggatca
ttaagacagttagattctaaattaacggcaaaacgaaagctaagcgtatttatatatagt
gtcaatgatttcactgatttcaatgcgcgttcgcaaagtgaagcattagatgagttagat
aaattaggttttacaacgaataaaaatagagcgcgtgtaaataatatcgatggtgtttta
gagtatattgaaaaatggacaagccaaagagagtcattaccttatgatattgatgggatt
gttattaaggttaatgatttagatcaacaggatgagatgggattcacacaaaaatctcct
agatgggccattgcttataaatttccagctgaggaagtagtaactaaattattagatatt
gaattaagtattggacgaacaggtgtagtcacacctactgctattttagaaccagtaaaa
gtagctggtacaactgtatcaagagcatctttgcacaatgaggatttaattcatgacaga
gatattcgaattggtgatagtgttgtagtgaaaaaagcaggtgacatcatacctgaagtt
gtacgtagtattccagaacgtagacctgaggatgctgtcacatatcatatgccaacccat
tgtccaagttgtggacatgaattagtacgtattgaaggcgaagtagcacttcgttgcatt
aatccaaaatgccaagcacaacttgttgaaggattaattcactttgtatcaagacaagcc
atgaatattgatggtttaggcactaaaattattcaacagctttatcaaagcgaattaatt
aaagatgttgctgatattttctatttaacagaagaagatttattacctttagatagaatg
gggcagaaaaaagttgataatttattagctgccattcaacaagctaaggacaactcttta
gaaaatttattatttggtctaggtattaggcatttaggtgttaaagcgagccaagtgtta
gcagaaaaatatgaaacgatagatcgattactaacggtaactgaagcggaattagtagaa
attcatgatataggtgataaagtagcacaatctgtagttacttatttagaaaatgaagat
attcgtgctttaattcaaaaattaaaagataaacatgttaatatgatttataaaggtatc
aaaacatcagatattgaaggacatcctgaatttagtggtaaaacgatagtactgactggt
aagctacatcaaatgacacgcaatgaagcatctaaatggcttgcatcacaaggtgctaaa
gttacaagtagcgttactaaaaatacagatgtcgttattgctggtgaagatgcaggttca
aaattaacaaaagcacaaagtttaggtattgaaatttggacagagcaacaatttgtagat
aagcaaaatgaattaaatagttag
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