Shewanella avicenniae: JYB87_05845
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Entry
JYB87_05845 CDS
T07845
Symbol
rlmM
Name
(GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
savi03009
]
JYB87_05845 (rlmM)
Enzymes [BR:
savi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
JYB87_05845 (rlmM)
Ribosome biogenesis [BR:
savi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB87_05845 (rlmM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QSX34757
UniProt:
A0ABX7QTE7
LinkDB
All DBs
Position
1319159..1320226
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AA seq
355 aa
AA seq
DB search
MNNLFLFCRAGYEKDCAAEIQDAANLFGVAGYVKAAKDAYVQFQCFTAEDADKLGKELSL
ERLIFARQMFVSSDLLTDLPAEDRITPIVEALQAAPKAGELRVETPDTNEAKELLTFCRK
FTVPLRQALKNNGLLHAKENSYRPIIHVCFLGSDKAFVGYSYSFNSSPYFMGIPRLKFPS
AAPSRSTLKLDEAFIHFIPEDEAEQRLSGGLQAVDLGACPGGWTYQLVRRGMFVSAIDNG
PMQDELMKSGQVTHFREDGFRYEPKRKNVYWLVCDMVEKPSRVAELMEQWAIKGWFKEAI
FNLKLPMKSRYKEVSTILGRMDTILKENDIHHFSLRCKHLYHDRDEVTVHLSLVK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaataacctgtttctattttgccgtgctggctatgagaaagactgtgccgcagagatc
caagatgcggccaatctgtttggggtggctggctatgtcaaagcggcgaaagatgcttat
gttcagtttcaatgcttcaccgctgaagatgccgataagctaggcaaagagctatcgcta
gagcgtttgattttcgcgcgacagatgtttgtaagtagtgacttactgacagatttaccg
gcagaagaccgtatcacccctatcgttgaggcactgcaagcagcaccgaaagcgggagaa
ctgagggttgaaacgcctgataccaacgaagcgaaagagttgctgaccttctgccgcaag
tttaccgtgcctctgcgtcaagcgctaaaaaacaacggcttgttgcatgcgaaggaaaat
agctatcggccgattattcatgtctgctttcttggctcagataaagcattcgtgggttat
tcctacagttttaacagctcaccttattttatgggcatccctcggcttaagtttccatct
gccgcgccaagccgttcaacactcaagttggatgaagcctttattcacttcattcctgag
gatgaagcggaacagcgtttatccggtggcttgcaggcggtggatttaggggcgtgtcct
ggcggttggacttatcagcttgtacggcgtggcatgtttgtctcggctatcgacaatggc
ccaatgcaagatgaactgatgaaatcagggcaggtgacccatttccgcgaagatggattc
cgttacgagccaaagcgtaagaatgtttattggctggtgtgcgatatggttgagaagcca
tcgcgggtggcggagttaatggaacaatgggcgattaaaggctggttcaaagaagcgatc
tttaacttaaagttgccgatgaaaagccgttacaaagaggtaagtaccattcttggccgg
atggataccatactcaaagaaaacgatattcaccactttagcttgcgttgtaagcatctg
taccacgaccgtgatgaggtcacagtgcacctgagtttggttaagtaa
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