Shewanella avicenniae: JYB87_10020
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Entry
JYB87_10020 CDS
T07845
Name
(GenBank) pyridoxal phosphate-dependent aminotransferase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
savi
Shewanella avicenniae
Pathway
savi00270
Cysteine and methionine metabolism
savi00450
Selenocompound metabolism
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
savi01230
Biosynthesis of amino acids
Module
savi_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JYB87_10020
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JYB87_10020
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
savi01007
]
JYB87_10020
Enzymes [BR:
savi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
JYB87_10020
Amino acid related enzymes [BR:
savi01007
]
Aminotransferase (transaminase)
Class II
JYB87_10020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QSX32123
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Position
complement(2267563..2268732)
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AA seq
389 aa
AA seq
DB search
MQFNFDEQVERRGSNSYKWDSADDAQMLPMWVADMDFRTAPAIIEALHARVDHGIFGYTK
VPERYFTAVTNWFATRHNFRFSPQSVLFTTGVVPALSAIIQALVKPGEGVIVPMPAYNCF
FSSIRNSRCQQIDSPLLNDNGHFSFDFADIAAKAADPNNTLLLLCNPHNPVGRSWREDEL
RQLGEICFSNNVTVLSDEIHCDLMMPGQTHIPFASLGDEFLQKSVSCSSPSKSFNLAGVH
VANILVEDAEFRKRIDKQININEVCEISPFAVTALIAAYEQGAPWLDELRSYLAQNFATV
RDFIAHELPMIQVTPLEATYLAWLDCRALPVSSKVLADKLYQEQHLWLSDGTVYGADGDG
FLRMNLATNHGRIVEGLQRLKAAVNDICG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaactttgatgaacaggtagagcgccgcggcagcaactcctataaatgggac
agtgccgacgatgcgcagatgttgcctatgtgggtcgcggatatggattttcgtaccgcg
ccagcgatcatcgaagcgttacatgcgcgcgtagaccatggcatttttggttacaccaaa
gtgcctgagcgctatttcaccgcggtaaccaattggtttgccacgcggcacaactttcgc
tttagcccccaatctgtgctgtttaccaccggtgtagtgccagcgttgtcggcgattatc
caagccttggtgaaaccgggcgagggtgtaattgtgcctatgcctgcgtacaactgcttc
ttttcatcgattcgtaactcacgatgtcagcaaatcgacagcccgctactgaacgacaat
ggccattttagctttgattttgctgacattgccgcaaaggccgccgatcccaacaacact
ctgctattgctatgcaatccgcataatccggtggggcgcagttggcgtgaagatgaactg
cgtcaattaggtgaaatctgcttttccaataacgtgactgtgctgtcggatgaaattcat
tgtgacttgatgatgccggggcagactcatattccgtttgcctctctcggtgatgagttt
ttgcaaaagtcggtcagttgcagttcgcccagtaagtcgttcaacttagctggcgtgcat
gtggcgaacatactggtagaggatgccgagtttcgtaagcgcatcgataaacagatcaat
attaatgaagtctgtgaaatcagcccatttgcggtcacggcattaattgcagcctacgaa
caaggcgcgccttggttagatgagttgcgcagttatttggcgcagaactttgccacggtg
cgcgattttatcgcccatgagttgccgatgatccaagtgacaccgctcgaagccacttac
ttagcgtggttagattgccgagctctgccagttagcagcaaagtgttggcagataagctc
tatcaagagcagcatttgtggctcagtgatggcactgtttacggcgctgacggtgatggt
tttttacgcatgaatctggccaccaatcacggccgaattgttgaaggcttgcagcgttta
aaggcagccgtaaacgatatttgtggttaa
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