Shewanella avicenniae: JYB87_10225
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Entry
JYB87_10225 CDS
T07845
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
savi
Shewanella avicenniae
Pathway
savi00220
Arginine biosynthesis
savi00250
Alanine, aspartate and glutamate metabolism
savi00430
Taurine and hypotaurine metabolism
savi00910
Nitrogen metabolism
savi01100
Metabolic pathways
savi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
JYB87_10225
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JYB87_10225
00220 Arginine biosynthesis
JYB87_10225
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
JYB87_10225
Enzymes [BR:
savi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
JYB87_10225
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
QSX32159
LinkDB
All DBs
Position
complement(2316279..2321126)
Genome browser
AA seq
1615 aa
AA seq
DB search
MALNSSTPSVLLENVVSLIHNKIAPEHATQVEQFAACLYSQMSRDDLLARNDSDLYGAIL
SLWNALDSTAIGQTHMRVFNPSQSKHGWQSTHTIIEVVQPDMPFLVDSLSMALSRLGVTA
HMMLHTPLAIDRNGDRIERVATMKSANDQSDKIAVFLIEIDRLSSDDDITQIEKELETTL
ADVAAAVNDWLPMMDKMASIAKDLPNQPFPGAKQEMDEAISFIEYLSDHHFTLLGYRFYE
LRRVEGDVELVPDMESSLGLMKKPSKDKHEHGLRLSSFSDSARRQALDSKLLVLTKSSSR
SRVHRPAYVDYVGIKRFDDKGNVIGEDRFVGLYTSNLYNRSPRAIPMLAEKVQRVMDMSE
LTPRSHDFKTLLNILENLPRDEIIQASVEELYQMAHGVLQMQDRDKLKLFVRKDGYGRFI
SCLVYVSKDRYNTRLRQDSQRILAQSFNATEEVEFTTYFSESSLCRTHYRVKVDNNNNMD
VDVAQIEQNLIEAARSWNDKLSAALHSAAGEEEATTYFKRYATAFPQSYKDDVLPPSAVV
DIQQLEALNDNHRLGMLFYQPQESAKGSNQVRLKLFHKDEPIHLSDVLPMLENFGLRVIN
ERPYEVITSDGATYWILDFLMTVQHAVSDEIVDSQDRFQTALSMVWDKKLEDDGFNRLVL
ATNLTGREVSVLRAYAKYMRQIDATFSQAYIEETFARYPQIADTLVKMFVRKFNPKLKTR
TVAKFVEQITMRLEDVASLDDDRIIRRYLDLINATLRTNFYQNDAAGEAKSYVSFKFAPD
QIPEMPKPLPKYEIFVYSPRVEGVHLRGGRVARGGLRWSDRREDFRTEVLGLVKAQQVKN
TVIVPVGAKGGFVCKQMPKQGSREAVFQEGQECYRLFIRGLLDITDNIVNKEIVPPVDVV
RHDEDDPYLVVAADKGTATFSDLANSIAIEYGFWLGDAFASGGSNGYDHKKMGITARGAW
ESVKRHFREVGIDCQTTEFTCVGIGDMAGDVFGNGMLLSEHTLLQAAFNHMHIFIDPTPD
AAASFAERQRMFELPRSSWEDYNKKLISKGGGIFLRSAKSITLTPEIKKMIGTSKASMNP
TELIHELLKMPVDLLWNGGIGTYVKSSHETNAEVGDRANDALRVNGNQLNAKIIGEGGNL
GCTQLGRIEYCANGGRMNTDFVDNVGGVDCSDNEVNIKILLNSLVAEGEMTVKQRNKLLE
EMTHEVADIVIQDCKDQTRTISVTQAHAAGQLKEHIRFIQYLEKEGKLDRALEFLPSDDE
LNERLASNRGLTRPELSVLVAYAKMVLKEQLVTPTVTDDPWLSQLLVDYFPQKLQQRFAD
KMSAHPLRGEIIATSLANQIVNEAGLNFIQRMQDETGASVAEAAVCYSMAREIFGFGDIT
SAISRLGSDVPAVVQSEMLHQLRRNMRRVCRWLLRNRNRVLNIEETANFYKPVFENLRDN
IHHYLVEEEWHGIAVDISALEREGVPRDLAGLVAKMSTLFCSLDIAQIAEVEQKPVNLVA
ETYYQLGAKVELHWFLEQITAQKASNHWQALARAAFREELDWQQRSLTSVVLHNCEAVCD
SAAVITQWLENNQSLLERWFSMLADFKTSGENEFAKFSVALRELNLLILHCEGQG
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaacagctcaacgccctccgtgttgctggaaaatgttgttagcctcatccat
aacaaaatcgcgccagaacatgcgacgcaagttgaacaatttgccgcatgtttatactcg
caaatgtccagggatgatcttcttgctcgcaatgacagcgacctttacggcgccattctc
agtctttggaatgcgctggatagtaccgccatcggccaaactcacatgcgggtgttcaac
ccaagtcaatctaagcatggctggcaatcaacccacaccattattgaagttgtgcaaccg
gatatgccgtttttggtcgattcgctcagcatggcattaagtcggttaggggtcactgcc
cacatgatgctgcatacgccactggctattgaccgcaacggtgatcgtattgaacgcgtt
gccaccatgaaaagcgccaatgaccaaagcgacaaaattgcggtatttttgattgagatt
gaccgcttaagtagtgacgacgatataactcagattgaaaaagagctcgaaactaccctc
gcagatgtcgcagccgcagtaaatgattggctgccgatgatggacaaaatggcgagtatc
gctaaagaccttcctaaccaacctttccctggcgccaaacaagagatggacgaagcgata
agctttatcgaatatctcagcgaccatcatttcaccctgttgggctatcgtttttatgaa
ttgcgccgtgttgagggtgacgttgagttagtgcctgacatggaaagcagcttgggcttg
atgaaaaagccaagcaaagataagcatgaacatggtttgcgcttatccagtttctctgat
tccgcccgtcgccaagcgttagacagcaaattgttagtgctgaccaagagcagctctcgc
agtcgtgtgcatcgccccgcttatgttgattacgtgggtatcaagcgttttgacgacaaa
ggcaacgtgattggtgaagatcgtttcgtcggcttgtacacctcaaacctgtataaccgc
agcccccgcgcgatcccaatgctcgctgaaaaagttcaacgtgtgatggacatgtctgag
ctgaccccacgttctcatgatttcaaaaccttgctgaatattcttgagaacttgccgcgt
gatgagatcattcaagcgtcagtagaagagctgtaccaaatggcgcacggcgtgttgcag
atgcaagatcgtgacaagctgaagctatttgtacgcaaagacggctatggccgctttatt
tcttgtttggtgtatgtttctaaagaccgctataacacccgcttacgtcaagattcacaa
cgtattctggcgcaaagttttaacgcgactgaagaagtggaatttaccacctatttttct
gaatcttcactctgtcgtacccattaccgggtcaaggtagacaacaacaataatatggac
gtcgatgtggcacagattgaacaaaatttgattgaagcagcacgctcgtggaacgacaaa
ctctccgccgccctgcacagtgcagcaggtgaagaggaagccaccacctatttcaaacgt
tatgcaacggcgttcccacaaagctataaagatgacgtattgccgccatcggccgtggtc
gatattcaacaacttgaagcactgaacgacaatcatcgtttgggcatgttgttctatcaa
ccacaagaatctgctaaaggcagcaaccaagttcgcttgaagttgttccacaaagatgag
ccgatccatctgtcagatgtgttgccaatgttggaaaactttggcctgcgggtgattaac
gaacgtccttatgaagtgattacctcagacggcgcaacctactggattttggacttctta
atgacagtgcaacatgcagtgtcagatgagattgtcgatagccaagaccgcttccaaacc
gcgctgtcaatggtgtgggataagaagctcgaagatgacggctttaaccgcctcgtgttg
gccactaacctgaccggtcgtgaagtgtcagtactgcgtgcttacgctaagtacatgcgc
cagattgacgcgactttcagccaagcctatatcgaagaaaccttcgcgcgttatccgcaa
atcgccgatacgctagtgaagatgttcgtgcgtaagttcaatcctaagttgaaaactcgc
acggtggcaaagtttgttgaacagatcaccatgcgcctagaagacgtggcgagcttggat
gatgaccgtatcattcgccgctatttggatctgattaacgccacactgcggactaacttc
tatcagaacgatgcggctggcgaagcgaagagctatgtatccttcaagttcgcacctgac
caaattccagagatgccaaaaccgctgccgaagtacgaaatcttcgtttacagcccacga
gttgaaggtgtgcatctgcgtggtggtcgtgtggctcgcggtggtttgcgttggtcagat
cgtcgtgaagacttccgtaccgaagtgcttgggttggtaaaagcacagcaagtgaagaac
acagttattgtgccggtgggcgcaaaaggtggctttgtttgtaaacagatgccgaagcag
ggcagccgtgaagcggtattccaagaaggacaagaatgttatcgcttgtttattcgagga
ctgctggatatcaccgacaatattgtcaataaagagatcgtgccaccggttgatgtcgta
cgtcacgatgaagatgatccttatctggtggtggccgcagacaaaggtactgcaaccttc
tctgacttggccaacagcattgccattgaatatggtttctggttaggcgatgcgtttgct
tctggcggttctaacggttacgaccataagaaaatgggtatcactgcccgtggtgcatgg
gaatcagtgaaacgtcacttccgcgaagtgggtatcgactgtcaaaccaccgaatttacc
tgtgtgggtatcggtgatatggctggtgacgtgtttggtaacggaatgctgctgtctgag
cacaccctgttgcaagcggctttcaaccacatgcacatctttatcgacccaacgccggat
gccgccgcaagttttgctgaacgtcaacgcatgtttgaactgccgcgctctagttgggaa
gactacaacaagaagttgatctccaaaggcggtggtatcttcttgcgtagtgctaagtcc
atcaccttgactcctgaaatcaagaagatgattggcaccagcaaagcgtcaatgaaccct
acagagttgatccacgaactgctgaaaatgcctgtcgatctgttgtggaacggtggtatc
ggtacttacgttaagtctagccatgaaaccaacgcagaagtgggcgaccgtgccaacgat
gcgctgcgggtaaacggcaatcagttgaatgccaaaatcatcggtgaaggtggtaactta
ggctgtactcaactaggtcgtatcgaatattgcgccaacggtggccgcatgaacaccgac
ttcgttgataacgtgggtggtgtggactgctcagacaatgaagttaacatcaagattttg
ctgaatagcctcgtggctgaaggcgaaatgacggtgaaacagcgtaacaaactgctggaa
gagatgacccacgaagtggccgacatcgtgatccaagattgtaaggatcaaactcgtacc
atttcggtaacacaagcccatgctgccggtcagctcaaagagcatatccgctttatccaa
tatttggagaaagagggcaaactcgaccgcgcgctggaattcttgccatctgacgacgag
ttgaacgaacgtctggcgagtaatcgtggcttgactcgccctgagctgtcggtgttggtg
gcatacgccaagatggtgttgaaagaacagttggtaaccccaaccgtgaccgacgatcct
tggctgagccagttactggtggattacttcccacaaaaactgcaacaacgctttgccgac
aagatgtcagcgcacccactgcgtggtgaaattattgccacctcgctggcgaaccagatt
gttaacgaggccggacttaacttcatccaacgtatgcaggatgagactggtgcctcagtt
gcagaagccgctgtatgttactctatggcaagagaaatatttgggtttggtgatataacc
tctgccatttctcgcttgggtagtgatgtacctgccgtggtacagagtgaaatgttgcat
cagctgcgtcgtaatatgcgccgcgtctgccgttggttgctgcgtaatcgcaatcgtgta
ctgaacattgaagaaactgcaaacttctacaaaccagtattcgaaaacctgcgtgacaat
attcaccattacttagttgaagaagaatggcatggcatcgctgttgatattagcgcgctg
gagcgtgaaggtgtgccacgtgacttggctggtttagtagccaaaatgagcacactgttc
tgtagcttggatatcgcgcaaatcgcagaagtagagcaaaaaccagtaaatttggtagcc
gaaacttattaccaactcggcgccaaagtggaattgcattggttcctagaacagattact
gctcaaaaagcatcgaaccattggcaagccttggcacgcgctgcattccgcgaagagcta
gattggcagcaacgttctctgacctcagtggtactgcacaattgtgaggcagtgtgtgac
tccgcagcagtcatcacgcaatggctagagaacaaccaaagcttgttagagcgttggttc
agtatgctggcggactttaaaacttctggtgaaaatgaattcgccaagttctcggtcgcg
ctaagagagttaaatctgctcattttgcactgtgaagggcaaggataa
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integrated database retrieval system