Shewanella avicenniae: JYB87_11165
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Entry
JYB87_11165 CDS
T07845
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
savi
Shewanella avicenniae
Pathway
savi01501
beta-Lactam resistance
savi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYB87_11165
01503 Cationic antimicrobial peptide (CAMP) resistance
JYB87_11165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
savi03036
]
JYB87_11165
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_11165
01504 Antimicrobial resistance genes [BR:
savi01504
]
JYB87_11165
Chromosome and associated proteins [BR:
savi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JYB87_11165
Transporters [BR:
savi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JYB87_11165
Antimicrobial resistance genes [BR:
savi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JYB87_11165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
CzcB_C
HH_MFP_RND
BSH_CusB
Biotin_lipoyl
BSH_YhbJ
YknX_C
BSH_CzcB
Beta-barrel_RND_2
HH_YBHG
NQRA_N
RND-MFP_C
BSH_YknX
DUF5612
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
QSX35487
UniProt:
A0ABX7QVG4
LinkDB
All DBs
Position
2531968..2532945
Genome browser
AA seq
325 aa
AA seq
DB search
MAALPSQAEQVSTYRVATTIAPSYLVLDGTIEAVKSATVSAQTSGRIVKLNFDVNDLVPA
GASLLEITSKEQGAELAAAEASYARAKALDVEAQQTLERYQALFPQGAISKGAMDQAIAN
AKSSQQAATAALAQVTKARENLKYTVVTSPYAGVMTARHVEEGETVSVGQPLLSGYATNK
MRIVMQVPQQYRQALVDAGTVDVTLADGRKFAIDKPQIFGFTDTQSHAYKVRLPLPENTP
ALLPGSWVKARFAISQRPLVQIPTSALYSVNELTGVYLKVDNSFVLQQVRIGENLNGHVE
VIAGLQDGDVIANNAYQVLMQHSAK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactaccaagccaagccgaacaggtctcaacctaccgtgtagccaccaccatt
gccccctcttatctggtgttagatggcactattgaggcggtaaaatctgccacagtatct
gcccaaacctcaggccgaattgttaaacttaatttcgatgtaaacgacttggttcctgcc
ggtgcctcgctattggaaatcaccagtaaagagcaaggcgccgagctggcagcggctgaa
gccagttatgcccgagccaaagcgttagatgttgaggcgcagcaaaccctcgaacgctat
caagcactgtttccacaaggtgcaatctctaaaggggctatggatcaagccattgccaac
gccaaatcatcccaacaggcggccacagctgctttggcgcaagtgacgaaagcgcgtgaa
aacctcaaatacacggtagtaacctcaccgtatgctggggtgatgactgctcgccatgtc
gaagaaggtgaaaccgtcagcgtgggtcaaccgctactttctggttatgccaccaacaag
atgcgcattgtgatgcaggtgccacagcaatatcgccaagcattagtggatgctggcact
gtggatgtcactcttgctgatggccgcaagtttgccattgataaaccacagatttttggt
tttaccgacacccaaagccatgcctacaaggtgcgcttaccacttcctgaaaacacccca
gcattattgcctggcagttgggtcaaagcccgttttgccattagccagcggccgctggta
caaattcccaccagcgcgttgtacagcgtgaacgagctgaccggagtttatctcaaagtt
gataacagttttgtgctgcagcaagtgcgcattggggaaaacctcaacggccacgtagaa
gtgattgccggattgcaggatggtgatgtgattgccaacaacgcctatcaagtgttgatg
caacactcagccaagtag
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