Shewanella avicenniae: JYB87_13925
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Entry
JYB87_13925 CDS
T07845
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
savi
Shewanella avicenniae
Pathway
savi01501
beta-Lactam resistance
savi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYB87_13925
01503 Cationic antimicrobial peptide (CAMP) resistance
JYB87_13925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
savi03036
]
JYB87_13925
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_13925
01504 Antimicrobial resistance genes [BR:
savi01504
]
JYB87_13925
Chromosome and associated proteins [BR:
savi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JYB87_13925
Transporters [BR:
savi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JYB87_13925
Antimicrobial resistance genes [BR:
savi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JYB87_13925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QSX35522
LinkDB
All DBs
Position
3142359..3143465
Genome browser
AA seq
368 aa
AA seq
DB search
MKKLVIALAIAAFGTAVAYRMQAADKAETGKAAHSQTIPVVTATVGQQALAADLRLIGKL
SAEHSVFIASQVTGKIEKVAVRSNEQVSAGQTLIVIDDAKAKAAVMEAEAYLADESRKLK
DYEKLAHSNAITQTEIDAQRASVNIATARLASAKAELEYHYIKAPFAGVIGLVSFSRGKM
VSQGEELLSLDDLSLLRLDLQVPEAHLSQLTLGMKVAANSAAWPAENFDGKVTAIDPRIN
EQTLNVRTRVQFQNLANKLRPGMMLNTRISFPATYLPVVPVQALEYSGTKRFVYKVDDKQ
IAHRTEVQLGTRVDNQVLITDGLKPGDEIVVQGLVNIRDGMQVKPLKPTAAVPEARQAAA
KENNDAAV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactcgttattgcgcttgcgattgcagcctttggcactgctgtcgcatataga
atgcaagccgcagataaagccgaaacaggcaaagctgcacattcacaaactattcccgtg
gtgacggcaacggttggccaacaagcattagcggcggatcttcgcctgattggcaaactc
agcgccgaacattcagtgtttattgcgtcccaagtcaccggcaaaattgaaaaagtggcc
gtgcgctccaatgaacaagtgagcgctgggcaaaccctgattgtgattgatgatgccaaa
gccaaggccgcggtgatggaagccgaagcctaccttgccgatgaaagccgtaagctgaaa
gattatgaaaagctggctcacagcaatgcgattacccaaaccgaaatagatgctcagcgc
gccagtgttaatatcgccacggcacgactcgcttcggcaaaagctgagctggaatatcac
tacatcaaagccccctttgcgggtgtgattggcttggtcagttttagtcgcggcaaaatg
gtcagccaaggcgaagaactgctatcgctcgatgatttgagtctgttaaggcttgacctg
caagtacccgaggcacacttgtcccagctgacgttaggcatgaaagtggctgcaaacagt
gccgcatggccagccgaaaactttgatggcaaagtcaccgccatcgacccacgtattaac
gaacaaaccctcaatgtgcgtacccgtgttcagtttcaaaatttagccaacaagctgcgc
cccggcatgatgctcaatacccgcatcagttttcctgcgacctatctgccagtggtaccg
gtacaagcgttggaatattcgggcaccaaacgctttgtctacaaagtggatgacaagcag
attgcccaccgcactgaagtgcaactggggactcgcgtggataaccaagtgttaatcacc
gatggccttaaaccgggtgatgaaatcgtggtgcaggggttagtgaatattcgcgatggc
atgcaggtaaaaccgctcaagccaacagccgccgtgccagaagctcgtcaagcagccgcc
aaggagaataacgatgctgctgtctga
DBGET
integrated database retrieval system
