Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA): USA300HOU_1390
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Entry
USA300HOU_1390 CDS
T00629
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sax
Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA)
Pathway
sax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
USA300HOU_1390 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sax03400
]
USA300HOU_1390 (nth)
Enzymes [BR:
sax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
USA300HOU_1390 (nth)
DNA repair and recombination proteins [BR:
sax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
USA300HOU_1390 (nth)
Prokaryotic type
USA300HOU_1390 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
iSTAND
HPD
Motif
Other DBs
NCBI-ProteinID:
ABX29400
LinkDB
All DBs
Position
complement(1521972..1522631)
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AA seq
219 aa
AA seq
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MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK
TPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR
KTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNRSHHQ
LIFFGRYHCLARKPKCDICPLLEDCREGQKRYKASLKEA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtaagaaaaaagcattagaaatgattgatgttatagcaaatatgtttccggat
gcagaatgtgaattaaaacatgataatccgttcgaattaactattgctgtattattgtca
gcgcaatgtacagacgttctagtaaatagagtaacaactgagctgtttaaaaaatacaaa
acgcctgaagattatttggcagtcagtgatgaagaacttatgaatgatattcgttctatc
ggtctgtatcgtaacaaagctaagaatattaagaaactttgtcaatctttgattgatcaa
tttaatggagaaataccacaaacacataaggaattagaaagtttagcaggtgtaggacgt
aaaactgctaatgtagtcatgagtgtagcatttgatgaaccttcattagctgttgatacg
catgtagaacgtgtttctaaacgcttaggtattaatcgttggaaagataatgtgagacag
gtagaagaccgtttatgttctgtcatacctagagatagatggaataggagccatcatcaa
ctcattttctttggaagataccactgtttagcccgaaaacctaaatgcgatatttgtcca
ctattagaagattgtagagaaggacaaaaacgttataaagctagtttgaaagaagcgtga
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