Shewanella amazonensis: Sama_0338
Help
Entry
Sama_0338 CDS
T00445
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
saz
Shewanella amazonensis
Pathway
saz00290
Valine, leucine and isoleucine biosynthesis
saz00660
C5-Branched dibasic acid metabolism
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
saz01210
2-Oxocarboxylic acid metabolism
saz01230
Biosynthesis of amino acids
Module
saz_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Sama_0338
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Sama_0338
Enzymes [BR:
saz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Sama_0338
4.2.1.35 (R)-2-methylmalate dehydratase
Sama_0338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
DUF4325
Motif
Other DBs
NCBI-ProteinID:
ABL98549
UniProt:
A1S2E3
LinkDB
All DBs
Position
407423..408028
Genome browser
AA seq
201 aa
AA seq
DB search
MQAFTTHTGLAVAIDSANIDTDQIIPKQFLSKVTKDGFGIHLFHDWRYLDDAGDIPNPEF
NLNKPRYKGATILLAQENFGCGSSREHAPWALADFGLRAIIAPTFADIFYGNAINNGLLP
VRLPEAAVRQLMDEVEANEGAEVTVDLENLKVVSPSGAEFSFTLAESARQNLLKGLDAIG
LTLAHEAAISEYESRIPAWRR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttactactcacacggggctggcggtggccatagattcggccaacatagac
acggatcagattatccccaagcagtttttgtccaaggtaaccaaggacggcttcggtatt
catctgttccacgattggcgttatctggacgatgccggtgacatccccaatcccgagttc
aacctcaacaagccaaggtataagggagccactattctgctggcccaagaaaactttggt
tgcggctccagtcgcgagcacgccccctgggcgctggcggactttggcctgcgcgccatt
atcgcgcccaccttcgctgacatcttctacggcaacgccatcaataacggcctgttgccg
gtacgcttgcctgaagccgcggtgcgtcagttgatggacgaagtggaagccaatgaaggt
gccgaggtgactgtagatctggaaaacctcaaggtggtgtcgccctcgggcgccgagttt
agctttaccctggctgagtctgcccgtcagaatctgcttaagggcctggatgccatcggc
ctgaccctggcccacgaagcggccatcagcgaatacgagtcacgcataccggcctggcga
cgctga
DBGET
integrated database retrieval system