Shewanella amazonensis: Sama_1420
Help
Entry
Sama_1420 CDS
T00445
Name
(GenBank) AcrB/AcrD/AcrF family protein
KO
K18138
multidrug efflux pump
Organism
saz
Shewanella amazonensis
Pathway
saz01501
beta-Lactam resistance
saz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sama_1420
01503 Cationic antimicrobial peptide (CAMP) resistance
Sama_1420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_1420
01504 Antimicrobial resistance genes [BR:
saz01504
]
Sama_1420
Transporters [BR:
saz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Sama_1420
Antimicrobial resistance genes [BR:
saz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sama_1420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
CCSMST1
Motif
Other DBs
NCBI-ProteinID:
ABL99627
UniProt:
A1S5H1
LinkDB
All DBs
Position
complement(1726807..1730052)
Genome browser
AA seq
1081 aa
AA seq
DB search
MSIITTSVQRPVTVWMFMLAVILFGMVGFSRLAVMLLPDLSYPTVTIRTLYDGAAPVEVE
QLVSKPIEESVGTVKGLRKISSVSRSGMSDVILEFEWGTDMDMANLDVREKLDIIALPLD
VQKPLLLRFNPNLDPIMRVALSREEASGDELKQLRTYADEELKRQLEGLPGVAAVRLSGG
LEQEVQILLNQERLSQLDLDAEQIRSRIAAENLNVSAGKVVQGDKEYLVRTLNQFNSLEE
LGQVVVYRNGQSLVRLFEVATIVDGHKERSDITRIGQRESIELAIYKEGDANTVTVAKKL
KQDIERINGKDPLAKMEIIYDQSEFIESAVSEVTSSALIGSILAMLVIYLFLRDIIPTLI
ISISIPFSVIATFNMMYFADISLNIMSLGGIALAVGLLVDNAIVVLENIDRYKQQGLSRI
DAAIKGTREVSGAIFASTLTTLAVFVPLVFVDGIAGALFSDQALTVTFALLASLLVALTS
IPMLASREGFKALPPLLEKESRAKPEGKMGKLKHYSATVFSFPFVLLFKWLPAALLTAAL
SLSRLFSWLMGMLLKPFTWLFNLGYRALEASYRPLLAAALKARVLTLVVALGITASAGLL
LPRLGMELIPNMDQGEFYVEILLPPGTEVGETDRVLQQLAFSIKDMPAVKHAYSQAGSGG
LMTSDVSRGGENWGRLQVVLADHDAFEQVSDVLRHEIRRIPELEAKVKYPELFSFRTPLE
IELRGYELDLLKQSADSLVRALGQSERFADINTSLRDGQPELAIHFDSNRLAALGMDAPT
VANRIAQRIGGTVASKYSLRDRKIDILVRAEETERDQISDIGNMIINPDAATPIPLSAVA
DVKLELGPSAINRISQQRVALVSANLAFGDLAEAVTEARSILAKQQLPASIQASFGGQNE
EMEHSFQSLQIALVLAVFLVYLVMASQFESFLHPLLILFAVPMAVSGSVFGLYLTGTHVS
VVVFIGLIMLAGIVVNNAIVLIDRINQLRSEGVEKLEAISEAAKSRLRPIMMTTLTTVLG
LLPMALGLGDGAEVRAPMAITVIFGLALSTLLTLVLIPVLYALFDRKEFVAKTPETAEAG
V
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataatcacgacttccgttcaacggccggtcaccgtgtggatgtttatgctcgcg
gtgatcctcttcggtatggtgggcttctcccgtctggcggttatgctgctgccggacttg
agctaccccacggtgaccatacgtaccctgtacgatggcgctgcacccgttgaagtagag
caattggtatccaagcctatcgaagagtcagtgggtaccgtaaaaggcctgcgtaaaatc
agctctgtgtcccgctctggtatgtccgatgtcatcctcgaattcgaatggggcacagac
atggacatggcaaacctggacgtgcgggaaaagctcgacatcattgccctgccgctggac
gtgcaaaagccattactgctgcgctttaaccccaacctcgaccccatcatgcgtgtcgca
ctgtcgcgggaggaagccagtggcgacgagctgaaacagctgcgtacctacgccgacgaa
gaactcaaacgccagctcgaaggcttacccggcgtggcagcagtgcgcctgtcaggtggt
ctggagcaggaagtgcaaatcctgctgaatcaggagcgtctgtcgcagcttgatttggat
gccgagcaaattcgcagccgtatcgcggccgaaaacctcaacgtctctgccggtaaagtg
gttcagggcgataaagagtatctggtacgcacccttaaccagttcaactcccttgaggag
ctgggccaggtggtggtgtaccgcaatggccagagcctggtacgtttgtttgaagtggcc
accatcgtcgatggccacaaggagcgaagcgatatcacccgcatcggtcagcgcgagtcc
attgagcttgccatctataaagaaggtgatgccaatacagtgaccgtggcgaaaaagctt
aagcaggatatcgaacgcatcaacggtaaagatcccctcgccaagatggaaatcatctat
gaccagtccgagttcatcgaaagcgccgtcagcgaagtcacctcctcagccttgattggc
tctattcttgccatgctggtgatttacctgttcctgcgtgacattattcccaccctgatt
atttccatctctatccccttttcggtgatagccacttttaacatgatgtatttcgctgat
atcagcctcaacatcatgtcgctcggtggtattgcactggcggtgggcctgttggtggat
aatgccattgtggtactggaaaatatcgacagatacaagcaacagggattatcgcggata
gacgccgccatcaaaggaacccgggaagtgagcggcgccatatttgcctccaccctgacc
acacttgcggtgtttgtccctctggtgttcgtagatggtattgccggcgccctcttctcc
gatcaggcgcttaccgtgacctttgccttgctcgcctccttgctggttgccctgacctcc
attcccatgctcgcatcccgcgaaggctttaaggccctgccgccactgctggagaaagag
tccagagccaaacctgaaggaaaaatgggtaagctcaagcattacagcgccacagtgttc
agctttccctttgttctgcttttcaaatggttaccagccgcgttattgaccgccgcactg
tccttgagccgcctgttttcctggcttatgggcatgctgctaaagccctttacctggttg
tttaacctgggataccgcgcactggaagccagctaccgtccactgcttgccgctgcactc
aaggccagagtccttactctggtggttgcccttggcatcacagccagtgcgggtcttttg
ctgccacgtctcggcatggagcttattcccaacatggatcagggggaattctatgtggaa
attctgttgccacccggcaccgaagttggtgaaaccgatagggtacttcagcagttggcc
ttctccatcaaagacatgcccgccgttaaacacgcctacagccaggcaggcagcggcggc
ttgatgacctcggatgtcagccgtggcggtgaaaactggggccgattacaggtggtactt
gccgatcatgatgcttttgagcaggtaagtgatgtgctgcgccatgaaatccgtcgtatt
cctgagctcgaagccaaggtcaaatatcccgaactcttcagcttccgcaccccgcttgaa
atcgagctgcgcggctatgagctggatttgctcaagcaaagcgccgacagtctggttcgc
gcactgggccagtcagagcgattcgccgacatcaataccagcctgcgggatggtcagcct
gagcttgccattcacttcgacagcaacaggttggcggcgctgggcatggatgcacccaca
gtggccaaccgtattgcacagcgtatcggtggtactgttgccagcaagtacagccttcgg
gatcgcaaaattgatatcctggtgcgcgccgaagaaaccgagcgagaccaaatcagcgat
atcggcaacatgatcattaacccggacgcggcgaccccaattccgctgtcggcagtggcc
gacgtcaaactcgaactgggaccatctgccatcaaccgtatcagccaacagcgcgttgca
ctggtatcggctaacctcgcctttggggatctggctgaggcggtcacggaagcccgcagt
attcttgccaaacagcagctgccagcctccattcaggcgagttttggtggtcagaatgaa
gaaatggagcactcattccagtcgctgcaaatcgcgctggttctggcggtgttcctcgtc
tatctggtgatggcgagtcagtttgagtctttcctgcatccgctgcttatcctctttgcc
gtgcccatggccgtcagtggcagcgtgtttggtctttacctcacaggaacacacgtgtct
gtggtggtgtttatcggccttatcatgctggccgggattgtggtaaacaatgccattgta
ctgattgaccgcatcaatcagctgcgcagtgaaggcgttgaaaaacttgaggctatcagc
gaggccgccaagtcgcgtttacgccctattatgatgaccacactgaccacggtacttggc
ctgttgcccatggcccttggtctgggtgatggcgcagaggtgcgcgccccaatggcaatc
acagtgattttcggtttggcgctgtctaccttactgacgctggtgttgattcctgtgctc
tatgccctctttgaccgcaaagagtttgtcgccaagaccccagagactgcggaggccggc
gtatga
DBGET
integrated database retrieval system
