Shewanella amazonensis: Sama_1542
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Entry
Sama_1542 CDS
T00445
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07660
two-component system, OmpR family, response regulator PhoP
Organism
saz
Shewanella amazonensis
Pathway
saz01503
Cationic antimicrobial peptide (CAMP) resistance
saz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sama_1542
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Sama_1542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
saz02022
]
Sama_1542
01504 Antimicrobial resistance genes [BR:
saz01504
]
Sama_1542
Two-component system [BR:
saz02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
Sama_1542
Antimicrobial resistance genes [BR:
saz01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
Sama_1542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
Motif
Other DBs
NCBI-ProteinID:
ABL99749
UniProt:
A1S5U3
LinkDB
All DBs
Position
complement(1878698..1879372)
Genome browser
AA seq
224 aa
AA seq
DB search
MRILVVEDDPLLSHHLKVQLSELGNQVQVANTAQEGFYQATNYPIDVAIVDLGLPDQDGI
ELITRLRDAELKAPILILTARVNWQDKVEGLNAGADDYLVKPFQKEELVARLDALVRRSA
GFVKPRITSGSLELDLAAKQVTLDSEVLEITAFEYLILEYLMRHSHEVVAKQRLLDVIYG
DKEGDPNTIEVMVSRLRKKLTRDGMDNPIVTIRGQGYKFNLPCS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctggttgtcgaagacgatcctttattgtcacatcacctcaaagttcaattg
agtgaactgggcaatcaggtccaggttgccaacaccgcacaggaaggcttttatcaggcc
accaattacccgattgacgttgccatcgtggatctgggcttaccggatcaggacggcata
gaacttatcactcgtttgcgagacgccgaactcaaggcgcctatccttattctgaccgcg
cgggtgaactggcaggacaaggtcgaaggactcaatgccggcgccgatgattacctggtc
aaacctttccagaaagaagagctggttgcccgtttggatgccttggtgcgccgcagtgcg
ggctttgtgaaaccccggatcacgtcaggatcgctggaactggatctggccgccaaacag
gttacgctcgactcagaagtacttgaaatcacagcatttgaatatcttattttggaatac
ctgatgcgacacagccatgaagtggtagccaaacaaagactgctggatgtgatttatggc
gataaagagggtgatccgaacaccatcgaagtcatggtcagtcggctgcgtaaaaaactg
acccgggatggtatggataaccccatagtgaccattcgcggccagggttataaattcaac
ctgccctgtagctga
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