Capillimicrobium parvum: DSM104329_04503
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Entry
DSM104329_04503 CDS
T08390
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00270
Cysteine and methionine metabolism
sbae00450
Selenocompound metabolism
sbae00670
One carbon pool by folate
sbae01100
Metabolic pathways
sbae01110
Biosynthesis of secondary metabolites
sbae01230
Biosynthesis of amino acids
sbae04980
Cobalamin transport and metabolism
sbae04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DSM104329_04503 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DSM104329_04503 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DSM104329_04503 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DSM104329_04503 (metH)
04980 Cobalamin transport and metabolism
DSM104329_04503 (metH)
Enzymes [BR:
sbae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
DSM104329_04503 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding
B12-binding_2
CdhD
Ins_allergen_rp
Motif
Other DBs
NCBI-ProteinID:
UGS38081
UniProt:
A0A9E6Y181
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All DBs
Position
4635325..4638837
Genome browser
AA seq
1170 aa
AA seq
DB search
MRDYAKTIRERVVIFDGGMGATLEQFDLTTEDYGGLPGKCHEALILHRPDVIAGVHDSMA
AAGAEVVQTNTFQASRLKLDEWGLGAYTLEINQVAAEIARHAIGGGDERFVAGSMGPTGF
LPASDDPTLGAMPFRKLVEVFDEQARGLLIGGVDLIIIETVQDILEAKAAIFGARDAFRT
VGRAVPIQVSVSLLPNGGKMLLGTDIDATLTTLEALKVDAIGLNCSTGPDDMRDAIRFLG
EFSPVPISCIPNAGLPIQGPNGETIFPEEPAPLAATLGEFVERYGVTIVGGCCGTTPAHI
HAIAERCRPHQVSPRPAPRPPRVSSMIAATPLVQDPSPTLVGERVNSQGSRKAKELLLAD
DYDGLVQVAEDQVEGGAHVLDLCVALTERSDEDEQMRQVAKRVSLTQPAPIQVDSTEPDV
IAKALDQIPGRAIVNSINLEAGRAKADVVVPLVVEHGAALIALTIDEVGMAKTADRKVEI
AQRIKEIACDEHGLDPELLIFDLLTFTLTTGDEEWRPSAVATIEGIRRVKAEIPGVKTSL
GVSNVSFGVGQPARAVLNSVFLHHCVEAGLDLAMVNPNHITPYGEIDEAERKLADDLVFD
RREDALELFIAHFESKGAVAEEEKADATAGMEPEEALHFHILRRKKDGVEDWIDRAVEKI
GAVPTLNDVLLPAMKEVGDKFGAGELILPFVLQSAEVMKRAVARLENYLDRIEGYTKGTV
VLATVFGDVHDIGKSLVNTILTNNGYTVVDLGKQVPIGTILDAAKEHDATAIGLSALLVS
TSKQMPLAIQELHQQNMEFPVLVGGAAINRDFALRALYPKGKESDEVYEPGLFYCKDAFE
GLAKMDAIVDPGAREKLVADTRDRARRLREHGAEPEELVTDDDSVRSEARIDNPVPEPPF
WGARELEIDLGEVFPHLDTHVLFKLHWGGRGVKGEEWQRLVSEDFQPRLERMWAEQDYLR
PRAKLGYFPCYSEGNEVVVLDPEDRETVLERFVFPRQPGHSRICLADFYRPKDSGELDVV
AFQAVTAGDEVTDLIAQLERDGEFAEQLFVHGLGVQTAEGMAEWMHARIRADLGIEDDQG
RRWSWGYPACPEQSELEKLFRVIDAPSIGLRLSGGFALEPEQSTVAIVAHHPQAVYFGMK
SGFLPKDKAPDDLVKGSQRDATVGAEVPAG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcgggactacgccaagaccattcgcgagcgggtcgtcatcttcgacggcggcatggga
gcgacgctcgagcagttcgacctcaccaccgaggactacggcgggctgccgggcaagtgc
cacgaggcgctgatcctccaccggcccgacgtcatcgccggcgtgcacgactccatggcc
gccgccggcgccgaggtcgtgcagaccaacaccttccaggccagccgcctcaagctcgac
gaatggggcctcggcgcgtacacgctcgagatcaaccaggtggcggcggagatcgcccgc
cacgcgatcggcggcggcgacgagcgcttcgtggccgggtcgatgggcccgaccggcttc
ctgccggcctccgacgacccgacgctcggcgcgatgccgttccgcaagctcgtcgaggtc
ttcgatgagcaggcccgcggcctgctcatcggcggcgtggacctcatcatcatcgagacg
gtccaggacatcctcgaggccaaggcggcgatcttcggcgcccgcgacgcgttcaggacg
gtcggccgcgcggtcccgatccaggtctcggtctccctgctgcccaacggcggcaagatg
ctgctcgggaccgacatcgacgcgacgctgacgacgctcgaggcgctgaaggtcgacgcg
atcggcctgaactgctccaccggcccggacgacatgcgcgacgcgatccgcttcctcggc
gagttcagcccggtgccgatctcctgcatcccgaacgccggcctcccgatccagggcccc
aacggcgagacgatcttccccgaggagcccgcgccgctcgccgcgacgctcggcgagttc
gtcgagcgctacggcgtgacgatcgtcggcggctgctgcggcacgacgccggcgcacatc
cacgcgatcgccgagcgctgccggccgcaccaggtctccccccgccccgcgccgcgcccg
ccgcgcgtgtcgtcgatgatcgccgcgactccgctcgtgcaggaccccagcccgacgctg
gtcggcgagcgcgtgaactcgcagggctcgcgcaaggccaaggagctgctgctcgccgac
gactacgacgggctcgtccaggtcgccgaggaccaggtcgagggcggcgcgcacgtgctc
gacctctgcgtcgcgctgaccgagcgctccgacgaggacgagcagatgcgccaggtcgcc
aagcgcgtctcgctcacccagccggcgccgatccaggtcgactcgaccgagccggacgtc
atcgccaaggcgctcgaccagatccccgggcgcgcgatcgtcaactccatcaacctcgag
gccggccgggcgaaggccgacgtcgtcgtcccgctcgtcgtcgagcacggcgcggcgctc
atcgcgctgaccatcgacgaggtcggcatggccaagacagccgaccgcaaggtcgagatc
gcgcagcggatcaaggagatcgcgtgcgacgagcacggcctcgaccccgagctgctgatc
ttcgacctgctcacgttcacgctgacgacgggcgacgaggagtggcggccgtctgcggtc
gcgaccatcgaggggatccgccgcgtgaaggcggagatcccgggcgtgaagacgtcgctg
ggcgtgtcgaacgtctcgttcggcgtcggccagcccgcccgcgcggtgctcaactcggtg
ttcctgcaccactgcgtggaggccgggctcgacctggcgatggtcaacccgaaccacatc
acgccgtacggcgagatcgacgaagccgagcgcaagctcgccgatgacctcgtcttcgac
cgccgcgaggacgcgctggagctgttcatcgcccacttcgagtccaagggcgcggtggcc
gaggaggagaaggccgacgcgaccgcgggcatggagcccgaggaggcgctgcacttccac
atcctgcgccgcaagaaggacggcgtcgaggactggatcgaccgcgccgtcgagaagatc
ggcgcggtcccgacgctcaacgacgtgctgctgccggcgatgaaggaggtcggcgacaag
ttcggcgccggcgagctgatcctgccgttcgtgctgcagagcgccgaggtcatgaagcgc
gccgtcgcgcggctggagaactacctcgaccgcatcgagggctacacgaagggcacggtc
gtcctcgccaccgtgttcggcgacgtccacgacatcggcaagtcgctggtcaacacgatc
ctcacgaacaacggctacaccgtcgtcgacctcggcaagcaggtgccgatcgggacgatc
ctcgacgcggccaaggagcacgatgccacggcgatcgggctctccgcgctgctcgtgtcg
acctcgaagcagatgccgctcgccatccaggagctgcatcagcagaacatggagttcccg
gtgctcgtcggcggcgcggcgatcaaccgcgacttcgccctgcgcgcgctctacccgaag
ggcaaggagtccgacgaggtctacgagcccgggctgttctactgcaaggacgccttcgag
ggcctggcgaagatggacgcgatcgtcgacccgggagcccgtgagaagctcgtcgccgac
acgcgcgaccgcgcccgccgcctgcgcgagcatggcgccgagcccgaggagctcgtgacc
gacgacgactcggtgcgctccgaggcgcggatcgacaacccggtgccggagccgccgttc
tggggcgcgcgcgagctcgagatcgacctcggcgaggtcttcccccacctcgacacccat
gtgctgttcaagctgcactggggcgggcgcggcgtgaagggcgaggagtggcagcggctg
gtctccgaggacttccagccgcggctggagcggatgtgggccgagcaggactacctgcgc
ccccgcgccaagctcggctacttcccgtgctacagcgagggcaacgaggtcgtggtgctc
gatcccgaggaccgggagacggtgctcgagcgcttcgtgttcccgcgccagccgggccac
tcgcggatctgcctggccgacttctaccggccgaaggacagcggcgagctcgacgtcgtc
gccttccaggccgtcacggccggcgacgaggtcaccgatctcatcgcgcagctcgagcgc
gacggggagttcgcggagcagctgttcgtgcacggcctgggcgtgcagacggccgagggc
atggccgagtggatgcacgcgcggatccgcgcggacctcggcatcgaggacgaccagggg
cgccggtggtcctggggctacccggcgtgcccggagcagtccgagctcgagaagctcttc
cgcgtgatcgacgcgccgtcgatcggcctgcggctgtcgggcgggttcgcgctcgagccc
gagcagtccacggtggcgatcgtggcccaccacccgcaggcggtctacttcggcatgaag
tcggggttcctacccaaggacaaggcgcccgacgacctcgtcaagggctcccagcgcgac
gcgacggtgggcgcggaggtgccggcgggctga
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