Sphingobium fuliginis KK22: H5V43_06615
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Entry
H5V43_06615 CDS
T06985
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H5V43_06615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_06615 (nth)
Enzymes [BR:
sbar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H5V43_06615 (nth)
DNA repair and recombination proteins [BR:
sbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H5V43_06615 (nth)
Prokaryotic type
H5V43_06615 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QOT72779
UniProt:
A0A292ZEG4
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All DBs
Position
1:1424798..1425448
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AA seq
216 aa
AA seq
DB search
MKKDQIFDFFSRLAEANPAPRTELEYGNVYQLLVAVLLSAQATDVGVNKATRALFRDVHT
PQQMVELGEEGLKQHIKTLGLFNAKAKNVIALSEILLRDFGGEVPQDRDVLTTLPGVGRK
TANVVVNTAFGQETFAVDTHIFRVGNRTGLAPGKTPLAVELKLEKNVPGPFRRDAHHWLI
LHGRYVCKARKPECWRCIVADLCRFKPKTPAPGTSP
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggaccagatcttcgatttcttcagccgcctcgctgaagccaatccggcgccc
cgaacggagctggaatatggcaatgtctatcagttgctggtcgcggtgctgctttccgcg
caggcgacggacgtgggcgtcaacaaggcgacccgcgcgctcttccgcgatgtccacacg
ccgcagcagatggtggaactgggcgaagaaggcctgaagcagcatatcaagaccctcggc
ctcttcaacgccaaggcgaagaacgtcatcgccctgtccgaaatcctcctgcgcgatttc
ggcggagaagtgccgcaggatcgcgatgtcctgaccaccctgcccggcgtcgggcgaaag
accgccaatgtcgtggtcaacaccgcgttcgggcaggaaacattcgcggtcgacacccac
atcttccgtgtcggcaatcgtaccggcctcgcgccgggcaagacgccgcttgccgtcgaa
ctgaagctcgagaaaaacgttcccggccccttccgccgcgatgcccatcactggctgatc
ctgcatggccgctatgtctgcaaggcgcgaaagcccgaatgctggcgctgcatcgtggcc
gacctctgccgcttcaagcccaagacgcccgcgcccggcaccagcccctga
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