Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E3912
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Entry
SbBS512_E3912 CDS
T00700
Symbol
mdtF
Name
(GenBank) multidrug resistance protein MdtF
KO
K18899
multidrug efflux pump
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Module
sbc_M00697
Multidrug resistance, efflux pump MdtEF-TolC
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbc02000
]
SbBS512_E3912 (mdtF)
01504 Antimicrobial resistance genes [BR:
sbc01504
]
SbBS512_E3912 (mdtF)
Transporters [BR:
sbc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SbBS512_E3912 (mdtF)
Antimicrobial resistance genes [BR:
sbc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SbBS512_E3912 (mdtF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
ACD10105
UniProt:
B2U4H9
LinkDB
All DBs
Position
3638217..3641330
Genome browser
AA seq
1037 aa
AA seq
DB search
MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTITVSATYPGADAQTVEDS
VTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDIAQVQVQNKLQLAMPSLPE
AVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVASNIKDPLSRTAGVGSVQLFGS
EYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQLGGMPQAADQQLNASIIVQTRL
QTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYSTVARYNGKPAAGIAIKLATGANAL
DTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIEISIQEVFKTLVEAIILVFLVMYLFLQ
NFRATIIPTIAVPVVILGTFAILSAVGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVI
AEDKLPPKEATHKSMGQIQRALVGIAVVLSAVFMPMAFMSGATGEIYRQFSITLISSMLL
SVFVAMSLTPALCATILKAAPEGGHKPNALFARFNTLFEKSTQHYTDSTRSLLRCTGRYM
VVYLLICAGMAVLFLRTPTSFLPEEDQGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKE
KDNVQSVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIQRAMIALSSINKAV
VFPFNLPAVAELGTASGFDMELLDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLE
DTPMFKVNVNAAKAEAMGVALSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRML
PDNINQWYVRNASGTMAPLSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMK
FMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVM
LVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIG
AIIEAARMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFV
PVFFVVVEHLFARFKKA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggctaactattttattgatcgcccggtttttgcctgggtacttgccattattatgatg
cttgcaggtggtctggcgatcatgaacttaccggttgcgcagtatccgcagattgcgcca
ccgaccattaccgtcagcgctacctatccaggtgccgatgcgcaaacggtagaagactcg
gtcactcaggtgattgagcaaaatatgaatgggcttgatggcctgatgtacatgtcttca
accagtgatgcggcgggtaatgcctctatcactctgaccttcgagactgggacatctcct
gatatcgcacaggttcaggtgcaaaataaactgcaactcgctatgccttcattacctgaa
gcggtgcagcagcaggggattagcgttgataagtcgagcagtaatattctgatggtagcg
gcgtttatttctgataacggcagcctcaaccagtacgatatcgcggactatgtagcgtct
aatatcaaagacccgctaagccgtaccgcgggcgttggtagcgtacagctctttggttcc
gagtacgccatgcgtatctggctggacccgcaaaaactcaataaatacaatctggtacct
tccgatgttatttcccagattaaggtgcaaaacaaccagatttccggtggtcaactgggt
ggcatgccacaggcggcagaccagcaactaaacgcctcgatcattgtgcagacgcgtctg
caaacgccggaagaatttggcaaaatcctgttgaaagttcagcaagatggttcgcaagtg
ctgctgcgtgatgtcgcccgcgtcgaacttggagcggaagattattccaccgtggcgcgc
tataacggcaaacctgctgccgggatcgccatcaaactggctaccggagcaaacgccctg
gatacctcgcgggcagtcaaagaggagctgaaccgcttatcagcctatttccccgcaagt
ctgaagacggtttatccttacgacaccacgccgtttatcgaaatttctattcaggaagtt
tttaaaacactggttgaggctatcatcctcgtcttcctggtcatgtatctgtttttgcag
aatttccgtgccacaatcatcccgacgattgccgtaccggtggttattctcgggacgttt
gcgatcttgtcggcggtcggtttcaccatcaacacgttaactatgttcgggatggtgctg
gcgatagggttactggtggatgacgccatcgtggtggtggagaacgtcgagcgtgtcatt
gcggaagataagctaccaccgaaggaagcgacgcataaatcgatggggcagatccaacgt
gcgctggtcggtattgctgttgttctttccgcagtgtttatgccgatggcctttatgagc
ggcgcaaccggggagatctaccgccagttctccatcacgctgatctcctccatgctgctt
tcagtatttgtggcaatgagcctgacccctgccctgtgcgccaccattctgaaagccgcg
ccggaaggcggtcacaaacctaacgccctgttcgcacgcttcaacacgctgtttgaaaaa
tcaactcagcactataccgatagcacccgctcgctgttgcgttgtaccggtcgctacatg
gtggtctacctgctgatttgcgccgggatggcggtgctgttcctgcgtacaccgacctct
ttcttaccagaagaggatcagggggtatttatgaccaccgcgcagttaccttccggtgcc
accatggttaacaccacgaaagtgctgcaacaggtgacggattattatcttacaaaagag
aaagataatgttcagtcggtgtttaccgttggcggctttggcttcagcggccaggggcaa
aacaacggcctggcgtttatcagtctcaagccgtggtctgaacgtgtcggtgaggaaaac
tcggttaccgcgatcattcagcgggcaatgattgcgttaagcagtatcaataaagccgtc
gtcttcccgttcaacttacccgcggtggctgaactgggtaccgcgtcaggttttgatatg
gaactgctggacaacggtaacctggggcacgaaaaactaacccaggcacgaaacgagctg
ttatcactggcagcgcaatcgcctgaccaggtcaccggggtacgcccgaacggcctggaa
gatacgccgatgttcaaagtgaacgtcaacgccgcgaaagctgaggcaatgggtgtggcg
ctgtctgatatcaaccagacaatttccaccgccttcggcagcagctacgtgaacgacttc
ctcaaccaggggcgggtgaaaaaagtgtatgtccaggcaggcacgccgttccgtatgttg
ccggataacatcaaccaatggtatgtacgcaacgcctctggcacgatggcaccgctttct
gcctactcgtctaccgaatggacctatggttcaccgcgattggaacgctacaacggcatc
ccgtcaatggagattttaggtgaagcggcggccgggaaaagtaccggtgacgctatgaaa
tttatggcagacctggtcgctaaacttccggcaggcgtcggctactcatggaccggactg
tcgtatcaggaagcgttatcctcaaaccaggctcctgcactgtatgccatttcactggtc
gtggtgttcctcgccctcgccgcactctatgagagctggtcaattccgttctcggtgatg
ttggttgttccgttaggcgtcgttggcgcattactggccaccgatctgcgcggcttaagt
aatgacgtctacttccaggttggtttgctgaccaccatcgggctttccgccaagaacgcc
atcctgattgtcgaatttgccgttgagatgatgcagaaagaagggaaaacgccgataggg
gcaatcatcgaagcggcgcggatgcgtttacgcccaatcctgatgacctctctggccttt
attctcggcgtgctgccgctggttatcagtcatggtgccggttctggcgcgcaaaacgcg
gtaggtaccggcgtgatgggcgggatgtttgccgcaacagtgctggcaatttacttcgtt
ccggtctttttcgttgtagtggaacatctctttgcccgctttaaaaaagcgtaa
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