Sphingobium baderi: ATN00_09425
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Entry
ATN00_09425 CDS
T04194
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00300
Lysine biosynthesis
sbd00550
Peptidoglycan biosynthesis
sbd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ATN00_09425
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ATN00_09425
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbd01011
]
ATN00_09425
Enzymes [BR:
sbd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ATN00_09425
Peptidoglycan biosynthesis and degradation proteins [BR:
sbd01011
]
Precursor biosynthesis
Amino acid ligase
ATN00_09425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
ALR22509
UniProt:
A0A0S3F4F1
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All DBs
Position
1890970..1892385
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AA seq
471 aa
AA seq
DB search
MDVEVDGDAGLDTSVTGFAIDNRKVAPGTVFGAFQGLRVNGEVYIPDAVKAGAIAVVARP
EAKVEGAVHIAHPNPRRLFALLAARYFSPFPDVTVAVTGTNGKTSTVELTRQLWRMLGHK
SASIGTLGVTTSVDQVSTGLTTPDIVTFLSNMSGLRREGITHAAFEASSHGLAQYRTEGL
PVVAGGFTNLSRDHLDYHGDMDSYFEAKMRLFDEVVAPDGAAVIWADDEWSDKVIERVTK
RGLRLLSVGVKGQALRLANRTPTQLGQALEIEADGKIYKVNLPLIGAYQAANALTAAGLV
VATGGDIAKVLELLSRVQPVRGRLERAVISKAGAPVYVDYAHTPDGLRAAIEALRPHTKG
RLIALFGAGGDRDAGKRPLMGKVATELADHVIVTDDNPRSEDPSVIRSAVMAGAPGAEEI
GGRRAAIAAAIAQAGADDIVLLAGKGHEQGQIIGDRVLPFDDVTVARECAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ctggatgtcgaggtcgacggtgacgccggcctcgacacgtccgtcacgggttttgcgatt
gataacaggaaggtcgcgccgggcacagtctttggcgcgttccaagggctgcgcgtcaat
ggtgaggtttatattcctgacgctgtgaaggcgggcgcgattgccgtcgtcgcccggccc
gaagccaaggtcgagggcgcggtgcatatcgcccaccccaatccgcgccgcctgttcgcc
ttgctcgccgcacgctatttttcgccttttcctgatgtaaccgtcgctgtcaccgggacc
aatggcaagacgtccactgtggaattgacgcgacagctttggcggatgctggggcacaag
tcggcgtccatcggcacgctgggcgtcaccacgtcggtcgatcaggtttcgaccggcctt
accacgccggacatcgtgacctttctgtccaacatgtcgggtctcagacgcgagggcatc
actcatgccgcgttcgaggcgtcgagccatggcctcgcccaatatcgaaccgaaggactg
ccggtcgtggcgggggggttcactaacctgtcgcgcgaccatctcgactatcatggcgac
atggacagctatttcgaagccaagatgcggttgttcgacgaagtggtcgcaccagatggc
gccgcggtcatctgggcagatgacgaatggtcggacaaggttatcgaacgggttacgaag
cgggggcttcgtctgctgagcgtcggggtgaaggggcaggcactgcgtcttgccaaccgc
accccgacccagttgggtcaggcgcttgagattgaagcggatggcaaaatctacaaggtc
aatctgccgctcatcggcgcctatcaggcggctaacgctctcacggcggcgggcctcgtc
gtggcgacgggtggggatatagccaaggtgctggaactcttgagccgggtccagccggtg
cgcgggcggctggagcgcgccgttatcagcaaggcgggcgcgccggtctatgtcgattat
gcccatacgcccgacggcctgcgcgccgctatcgaggcgctgcgtccgcatacgaagggc
cgcctgatcgctctctttggcgcgggcggagatcgcgacgcgggcaagcgaccgctgatg
ggtaaggtcgcgaccgagcttgccgaccatgtgatcgtgacggatgacaatccccgttcc
gaagacccctccgtcattcgttccgctgtgatggcgggcgctccgggtgccgaggaaatc
ggcgggcggcgcgccgccatcgccgcggccatcgcgcaggcgggggcggatgatattgtg
ctgctggcgggcaagggacatgagcaagggcagatcatcggtgaccgcgtgctgccgttc
gatgacgtcaccgtggcgcgggagtgcgcggggtga
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