Sorghum bicolor (sorghum): 110433966
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Entry
110433966 CDS
T01086
Name
(RefSeq) transcription factor APG-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
sbi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110433966
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110433966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
110433966
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110433966
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
TFIIA
Motif
Other DBs
NCBI-GeneID:
110433966
NCBI-ProteinID:
XP_021312912
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Position
3:complement(13096958..13100060)
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AA seq
610 aa
AA seq
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MMCAWCRSDSNEFAELLWENGQAVVHGRRKQTQAAFPPFTCGAASSSRAQEKQPGTDPVA
LLKTGLFGDFSSGLDATRDNVDLDDTVPWINYPIVEEDTAAPALAESYSPDFFSELHAAA
VAAAATNLSALPPPVQHTGNNNNRSTPVATTSRGPEPAKETHRIPIAGPATRPEPQAEFA
ATRKPRPEGGGEGLMNFSLFSRPAAMARASLQRPPQTGTDKASNVTTSTRVESTVLQSAS
GQRTAPVFADQRTPWSQSKEVRFSCAAAPTTATAGNLQQEMPRDMTPQKKVETRKASEVA
VATSSVCSGNGAGIGNDESWRQQKRKSQAECSASQDDDLDDDSGGMRRSGSRGTKRSRTA
EVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGSGL
CIPPMLLPPTMQHLQIPPIAHFPHLGMGLGYGMGVLDMNSTAAVPFPPMPGAHFPCSMIP
GTPPQGLGMPGRNTMPMFGVPGQAIHPSASSIQPFPSLAGLPVRPNLAPQASAVMANMVQ
EQQQGATQQQQSLNNEAQQGANTGDPQLQTTVQAENQHFSVPYSAQTESNQFLDGGGNRT
DTTGRNEAET
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgcgtggtgcaggtccgacagcaacgagttcgccgagctgctatgggagaac
gggcaggcggtggtgcacgggaggaggaagcagacgcaggccgcgttcccgcccttcact
tgcggcgctgccagcagcagcagagctcaagaaaagcagccaggtaccgacccggtggcg
ctgctcaagacgggcctctttggcgacttctcttccggcctagacgccacccgagacaac
gttgatcttgatgacaccgtaccatggatcaactaccccatcgtcgaagaagacaccgcc
gcacctgccctcgcagagagctacagcccagatttcttctcggagctccatgcagcggca
gttgcagcggcggcgacgaacctcagcgctctgccaccaccagtccagcacaccggcaac
aacaacaacagaagcacaccggttgccaccaccagcagaggaccagaacccgcaaaggaa
acccaccgcataccgattgcaggtccagccaccaggcctgagccacaagctgagttcgcg
gccaccaggaaacctcggccggagggcggcggagagggcttgatgaatttctccctcttc
tctaggccagcagccatggcgcgagcaagcctgcagaggccaccgcagacaggcacagac
aaggcgtccaatgtcaccacgagcacccgtgtggagtcgacggttctacagtcggccagt
gggcaaagaactgcacctgtgttcgcagaccagaggacgccgtggtcacaatctaaggag
gtgcggttttcatgcgcagcagcaccgacaacggcgacggctggtaacctgcagcaagag
atgccccgggacatgactccgcagaaaaaagttgagaccaggaaggcttctgaggttgca
gtcgctacttcatcggtctgctccggcaatggtgctggaataggaaatgacgagtcctgg
cgccaacaaaagaggaagagtcaggccgagtgttctgcaagtcaagatgatgatcttgat
gatgactccggtgggatgcgaagatcaggcagcagaggtacgaagcgcagccgcaccgcg
gaggtgcacaatttgtccgaaaggaggagaagggacaggatcaatgaaaaaatgcgcgcc
ctgcaagagctcatccccaactgcaacaagattgacaaagcctccatgctggatgaagca
attgagtacctcaaaaccctccagcttcaagtccagatgatgtccatgggaagtggactg
tgcattcctcccatgctgctgccaccaacaatgcagcacttgcaaattcctccgattgcc
catttccctcatctcggcatggggttgggttatgggatgggcgtcctcgatatgaacagc
acagcagcggttccatttccacccatgcctggtgctcacttcccttgttcaatgatccca
ggcacgccaccacaaggtcttggaatgcctggcagaaacacgatgccaatgtttggagtc
cctgggcaagcaatccatccctcagcatctagcatacagccattcccatctttggcgggt
cttcctgttaggccaaacctggcacctcaagcttcagccgtcatggctaacatggtgcag
gagcaacagcaaggggctactcagcagcagcagagcctgaataacgaagctcaacaggga
gcaaatacaggagatcctcaattgcagactaccgtgcaggctgagaaccagcattttagt
gtgccctattcagcacaaaccgaaagcaatcagtttttggatggtggtggcaacaggaca
gatactacagggagaaatgaagctgaaacataa
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