Sorghum bicolor (sorghum): 8055123
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Entry
8055123 CDS
T01086
Name
(RefSeq) 4-coumarate--CoA ligase-like 3 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00130
Ubiquinone and other terpenoid-quinone biosynthesis
sbi00940
Phenylpropanoid biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
sbi_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
8055123
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
8055123
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
8055123
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
8055123
NCBI-ProteinID:
XP_021311176
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Position
1:55503068..55510165
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AA seq
578 aa
AA seq
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MQDAVAASGPANAAATFYSAATGVYASTHPPVALPSDPSLSLVPHIFARLPAARPDAPAL
LDAATAEALSRADLRRLVSALAAGLRRRGGLRGGDVVLLALPNSVAFPVAFLAVLAAGSV
ATTMSPSSAPAEIAARVRDTSPALVFAAPDNVGKLPPLRVPVVLVPDAFHHLGDDGAPEF
APFRELLLFDSEPLMAPPVGQDDAAAILYSSGTGGRSKGVVLTHRNLIATVELFVRFEAS
QYAAPACDNVYLAALPMFHVYGLALFAVGLLSLGSTVVVMKRFDAGDAVKAIHRFKVTHF
PVVPPIMAALVHATKPAAMPLESLVQVSTGAAPSSGRLIDDFVKAFPHVDFIQGYGMTES
AAVGTRGFNTKQKKYASVGLLAPNMHARIVHMETACCLPPGSCGELWLHGPAIMKARLIT
GYLNHQDSRAINDGWLRTGDIAYFDFDGYLYIVGRLKEVIKYKGFQIAPADLEAILIEHP
GIVDVAVTSTEDKEAGEIPVAFVVRKSGSGLSCTQVMDYVAKQVSPYKKVRKVVFVESIP
KSPAGKVLRRLLKDSLAASAVAGPTSYSESNPMRHSRL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgccgtggcggcctccggacccgccaatgccgccgccaccttctactccgcc
gccaccggcgtgtacgccagcacgcaccctccggtggctctcccctccgacccttccctc
tccctcgtcccgcacatcttcgcccgcctgcccgccgcccgccccgacgccccggccctc
ctcgacgccgccaccgccgaggccctctcccgcgccgacctccgccgcctcgtctccgcc
ctcgcggcgggcctccgccgccgcgggggcctccgcgggggcgatgtcgtgctcctcgcc
ctgcccaactccgtcgccttccccgtcgcgttcctcgccgtcctcgccgccgggtccgtc
gccaccaccatgagcccgtccagcgcccccgccgagatcgccgccagggttcgggacacc
agccccgccctcgtgttcgccgcgcccgacaacgtcgggaagctcccgccgttgcgcgtc
ccggtcgtcctcgtccccgacgccttccaccacctcggggacgacggcgcccccgagttc
gcgcccttccgcgagttgctgctgttcgattccgagccactgatggcccctccggtggga
caggacgacgcggccgccatcctctactcgtcggggacgggcggccggagcaagggcgtc
gtgctcacgcaccgcaacctcatcgccacggtcgagctcttcgtgcgcttcgaggcctcg
cagtacgccgcacctgcttgtgacaatgtctacctggcggcgctgcccatgttccacgtc
tacggactcgcgctcttcgccgtgggcctgctctcgctcggttccacggtggtcgtcatg
aagaggttcgacgcgggcgacgccgttaaggccatccacagattcaaggtcacgcacttc
ccggtcgttccgcccatcatggcggctctggtgcacgccaccaagccagcggcaatgccg
ttggaatccttggtgcaggtgtccaccggtgcagcgccgtccagcggcaggctcatcgac
gactttgtcaaggctttcccccacgtcgatttcattcagggttatggcatgactgaatct
gctgctgtaggaactcgtggcttcaatacaaagcagaagaagtatgcttcagtaggactc
ctcgctccaaacatgcatgcaagaattgttcatatggaaactgcttgctgcctgcctcca
ggctcttgtggggagctctggctccatggtccagctataatgaaagcacgtttgatcaca
ggttacttgaatcatcaggattcacgtgcaataaatgatggctggctgcgaaccggtgac
attgcttacttcgatttcgatgggtacttgtacatagtgggccgcttgaaagaggtgatc
aagtacaaaggatttcagatagctccagctgacttggaagcaattttgatcgaacaccct
ggaattgttgatgtggctgtgacatctactgaggataaagaagctggagagataccagtt
gccttcgtggtgaggaaatctggaagtggcctttcatgcactcaagtgatggattatgtg
gccaagcaggtgtccccgtataagaaggtgcggaaggtggtgttcgtggagtcgatcccc
aagtcgccggctggaaaggttctgaggaggcttctcaaggactctcttgcagctagcgct
gttgctggtccaacaagttattctgagtccaatcccatgcgccattcgagactgtaa
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