Sorghum bicolor (sorghum): 8055177
Help
Entry
8055177 CDS
T01086
Name
(RefSeq) probable lipoxygenase 8, chloroplastic
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00591
Linoleic acid metabolism
sbi00592
alpha-Linolenic acid metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
8055177
00592 alpha-Linolenic acid metabolism
8055177
Enzymes [BR:
sbi01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
8055177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
Motif
Other DBs
NCBI-GeneID:
8055177
NCBI-ProteinID:
XP_002445903
UniProt:
C5YIS2
C9DHL8
LinkDB
All DBs
Position
7:complement(63894478..63912046)
Genome browser
AA seq
865 aa
AA seq
DB search
MAAASVRVTAVATIKVTVGGFLNSLRPSRAIDDVKDLIGRSLYLELVSSQLDAKTGQEKP
RLQSYAHKVADNDAGVVTYEADFDVPPGFGEVGAVLVTNEHHTEMFLEDVNLYSSSASAG
SNSDSDSDDGDDGARAAPLLAIRCKSWVAPKSADAKGNRKRVFFANKPYLPGQTPAGLRS
YRNKDLEQKRGDGRGERKSTDRIYDYDTYNDLGDPDSDAGKKARPVLGGSAQFPYPRRCR
TGRPMSATDPKTETRSSDNYVPRDEAFSEVKNLQFSVTTLRSVLHAAVPAVQSTLTDPNR
GFPSFFVIDKLFEDGVELPKAEQLGFLHSVVPRLLQILRDGPGDHVLLFDTPANVQKDKF
AWLRDEEFARETLAGMNPYAIELVTEFPLKSKLDPAVYGPAESAITAEVLERQMGRVMTV
AEAVSQKRLFMLDYHDLFLPYVHKIRAQANTTMYGSRTVFFLCDDGTLRLLAIELTRPAS
PTLPQWRRVFTSSTDTTESWLWRMAKSHVRAHDSGHHELVSHWLRTHCAVEPYIIAANRQ
LSEMHPVYQLLHPHFRYTMRINALARSALINAGGIIELSFSPQRYAMELSSVAYDKLWRF
DTEALPADLVRRGMAVEDPNAEHGVRLTVPDYPFANDGLLVWDAIKGWVTAYVARFYPDA
GTIAGDAELQAFWTDVRTVGHGDKKDAPGWPALDSPASLAHTLTTIIWVASAHHAAVNFG
QYDFAGYFPNRPSIARTNMPVEEPVDAAALAAFLDNPDQALRECFPSQVQATLVMAVLDL
LSTHSPDEEYLGGMETAPWNDDATVQAAYGKFNARLKEIEGIIDGRNKDPSLKNRCGAGI
VPYQLMKPFSQPGVTGMGIPNSTSI
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcatcggtgcgcgtgacggcggtggcgacgatcaaggtcaccgtgggtggg
ttcctgaacagcttgaggccgtccagggccatcgacgacgtcaaggacctcatcgggagg
tcgctctacctcgagctcgtcagctcccagctcgacgcaaagacggggcaggagaaacca
agactccagagctacgcccacaaggtggcggacaacgacgccggcgtggtgacctacgag
gccgacttcgacgtgccgccgggcttcggcgaggtcggcgccgtgctggtcaccaacgag
caccacaccgagatgttcctcgaggacgtcaacctctactcctcctcggcgtcggctggc
tccaactccgactccgactccgacgacggcgacgacggcgcccgcgccgcgccgctcctg
gccatccggtgcaagtcgtgggtggcgcccaagtccgccgacgccaaggggaacaggaag
cgcgtcttcttcgctaacaagccttacctgccggggcagacgccggcgggactccggagc
taccggaacaaggacctggagcagaagcgcggcgacgggcgcggcgagaggaagtccacc
gaccgcatctacgactacgacacctacaacgacctgggcgaccccgacagcgacgccggc
aagaaggcgcgccccgtcctcggcggcagcgcgcagttcccctacccgcggcggtgccgc
acgggccggccgatgtcggcgacggacccaaagacggagacgaggagcagcgacaactac
gtgcccagggacgaggcgttctcggaggtgaagaacctgcagttctcggtgaccacgctg
cggtccgtgctccacgccgccgtgccggccgtgcagtccacgctcaccgaccccaaccgc
ggattcccgtccttcttcgtcatcgacaagctgttcgaggacggcgtcgagcttcccaag
gccgagcagctgggcttcctccacagcgtcgtgccgcggctgctccagatcctccgcgac
ggccccggcgaccatgtcctcctcttcgacacgcccgccaatgttcagaaggacaagttt
gcatggctgagggacgaggaattcgcgagggagacgcttgccgggatgaacccgtacgcg
atcgagctcgtcacagagttccctctgaagagcaagctggacccggcggtgtacgggccg
gcggagtcggcgatcacggcggaggtgctggagcggcagatgggtcgggtgatgacggtg
gcggaggcggtgtcgcagaagcggctcttcatgctggactaccacgacctgttcctgccg
tacgtgcacaagatccgagcgcaggcgaacaccaccatgtacggctcgcgcaccgtcttc
ttcctctgcgacgacggcacgctgcggctgctcgccatcgagctgacgcggccggcgtcg
ccgacgctgccgcagtggcgccgcgtcttcacctcgtccacggacaccaccgagtcgtgg
ctgtggcggatggccaagtcgcacgtgcgcgcgcacgactcgggccaccacgagctcgtc
tcccactggctgcgcacgcactgcgccgtggagccctacatcatcgcggccaaccggcag
ctgagcgagatgcaccccgtgtaccagctgctgcacccgcacttccgctacaccatgcgc
atcaacgcgctggcgcggtcggcgctcatcaacgccggcggcatcatcgagctgtccttc
tcgccgcagaggtacgccatggagctcagctccgtcgcgtacgacaagctctggcgcttc
gacacggaggcgctccccgccgacctcgtccgcagggggatggccgtggaggaccccaac
gcggagcacggggtcaggctcacggtcccggactacccgttcgccaacgacggcctgctc
gtctgggacgccatcaagggctgggtgacggcctacgtcgcccggttctacccggacgcc
ggcaccatcgccggcgacgcggagcttcaggcgttctggacggacgtgcgcaccgtgggg
cacggcgacaagaaggacgcgccggggtggccggcgctggactcgccggcgagcctggcg
cacacgctgaccaccatcatctgggtcgcgtcggcgcaccacgccgccgtcaacttcggg
cagtacgacttcgccggatacttccccaaccggccgtccatcgcgcgcaccaacatgccg
gtggaggagcccgtggacgccgcggcgctcgcggcgttcctggacaacccggaccaggcg
ctccgcgagtgcttcccgtcgcaggtgcaggcgacgctggtgatggccgtgctggacttg
ctgtccacgcactcccccgacgaggagtacctcggcgggatggagaccgcgccgtggaac
gacgacgccacggtgcaggcggcgtacgggaagttcaacgcgcggctcaaggagatcgag
ggcatcatcgacgggaggaacaaggacccgagcctcaagaaccggtgcggcgccggcatt
gtgccgtaccagctcatgaagcccttctctcagcccggtgtcacagggatgggcatccct
aacagcacctccatctga
DBGET
integrated database retrieval system
