Sorghum bicolor (sorghum): 8056122
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Entry
8056122 CDS
T01086
Name
(RefSeq) 4-coumarate--CoA ligase-like 5
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00130
Ubiquinone and other terpenoid-quinone biosynthesis
sbi00940
Phenylpropanoid biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
sbi_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
8056122
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
8056122
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
8056122
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Collectrin
CSS-motif
Motif
Other DBs
NCBI-GeneID:
8056122
NCBI-ProteinID:
XP_002456793
UniProt:
A0A921RKM5
C5XFF3
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Position
3:70281113..70284768
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AA seq
555 aa
AA seq
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MAEPCPPGGIDPRSGFCAATRTFHSLRPSTELPPDSLPATAAAYAFSSLSSPLPDRPALV
DAATGIAVSYPSFLAAVRSLAGGLWSVLGLRPGDVALVVSPSRIDVPVIDFALMSIGAVV
SPANPASTADEYAHMVALSRPVVALAAPEVAAKLPRNLRCVVIGSDEYKGLSSAGGAAPP
PPVAVKQSDTAAVLYSSGTTGRVKAAAVSHRNLIALLCAHRDIRAMVDKEAAEAGEEPPP
PTVTLFPLPLFHVFGFMMMLRSVAMGETAVLMDRFDFVAALRAIERYRVTLLPAAPPVLV
AMIKSEEARRRDLSSLIVIGIGGAPLGREVAERFAAIFPNIELVQGYGLTESSGSVASTV
GPDECKAYGSVGKLASHLEAKIVDPSTGEALGPGQRGELWVRGPVVMKGYVGDDEATAAT
VDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP
YPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR
RELVEQAVSMVTSKL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgtgcccgcccggtgggatcgacccgcgcagcggcttctgcgccgcgacg
cggaccttccacagcctgcgcccgtccaccgagctcccgccggactcgctcccggccacc
gcggccgcctacgccttctccagcctctcgtccccgctccccgaccgccccgccctcgtc
gacgccgccaccggcattgccgtctcctacccctccttcctcgccgccgtccgctccctc
gcggggggcctctggtccgtcctcggccttcgccccggggacgtcgccctcgtcgtctcc
ccttcccgcatcgacgtccccgtcatagacttcgcgctcatgtccatcggcgctgtcgtc
tcgcctgccaacccggcgtccaccgccgacgagtacgcgcacatggtcgcgctctccaga
ccggtcgtcgcgctcgcggcccccgaggtggccgctaagctgccgaggaacctcaggtgt
gtcgtcatcggctcggatgagtacaagggcctctcctccgccggcggcgcggcgcctccc
ccgccggtggcggtgaagcagtccgacacggcggccgtgctgtactcgtcgggcactacg
ggccgggtcaaggccgccgcggtctcgcaccgcaacctcatcgccctgctctgcgcgcac
agggacatccgggctatggtggacaaggaggctgccgaggccggcgaggagccgcccccg
cctacggtgacgctgttccctctcccgctcttccacgtgttcggcttcatgatgatgctg
aggtccgtggccatgggggagaccgccgtcctcatggaccgcttcgacttcgtcgccgcg
ctgcgcgccatcgagcggtaccgagtcaccctgctgcccgcggcgcccccggtgctggtg
gccatgatcaagtccgaggaggcgcgccgccgcgacctctcctccctcatcgtcatcggg
atcggcggcgcgccactcggccgcgaggtcgccgagcgcttcgccgccatcttccccaac
atcgaactcgtccagggctacggtctgacggagtcatctggctccgtggcttcgacggtc
gggccagatgagtgcaaagcgtacggttcggtcgggaagctggcatcgcacttggaggcg
aagatcgtcgatccctccaccggcgaggcgctggggcctgggcagcgcggcgagctctgg
gtccggggaccagttgtcatgaaaggttatgtgggtgacgacgaggctactgcagcaaca
gttgattcagaaggctggttgaaaactggtgacctatgctacttcaatgaggatgggttt
ctctacattgttgatcggttgaaagagttgataaaatacaagggatatcaggtacctcca
gccgaactggagcatatcctgaattctcatcctgatatcatggatgcagcagttattccg
tacccagacgaagatgtcgggcaactaccaatggcttttatagtgaggaaaccaggctca
aaccttaccaagcaacaagtcatggatttcgtggctaaacaggtcgcaccgtacaagaaa
gtccgtcgagtggcctttgtttctgcaattcccaaatcgcctgctgggaagatcttgcgg
cgggagcttgtagagcaggccgtgtccatggttacctccaagctttga
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