Sorghum bicolor (sorghum): 8057784
Help
Entry
8057784 CDS
T01086
Name
(RefSeq) triosephosphate isomerase, cytosolic
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00010
Glycolysis / Gluconeogenesis
sbi00051
Fructose and mannose metabolism
sbi00562
Inositol phosphate metabolism
sbi00710
Carbon fixation by Calvin cycle
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi01200
Carbon metabolism
sbi01230
Biosynthesis of amino acids
Module
sbi_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
sbi_M00002
Glycolysis, core module involving three-carbon compounds
sbi_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
sbi_M00165
Reductive pentose phosphate cycle (Calvin cycle)
sbi_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
8057784
00051 Fructose and mannose metabolism
8057784
00562 Inositol phosphate metabolism
8057784
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
8057784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8057784
Enzymes [BR:
sbi01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
8057784
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
8057784
Exosomal proteins of bladder cancer cells
8057784
Exosomal proteins of melanoma cells
8057784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
C2
DUF6137
Motif
Other DBs
NCBI-GeneID:
8057784
NCBI-ProteinID:
XP_002456619
UniProt:
A0A921UQ60
C5XPP7
LinkDB
All DBs
Position
3:67131179..67138311
Genome browser
AA seq
502 aa
AA seq
DB search
MASRKFFVGGNWKCNGTGEDVKKIVTVLNEAEVPTEDVVEVVVSPPFVFLQQVKGLLRLD
FAVAAQNCWVRKGGAFTGEISAEMLVNLQVPWVILGHSERRALLGESSDFVADKVAYALT
QGLKVIACIGETLEQREAGTTMDVVAAQTKAISEKISDWTNVVLAYEPVWAIGTGKVATP
AQAQEVHDGLRKWLHSNVSPAVAESTRIIYGGSVNGANCKELAAQADVDGFLVGGASLKP
EFVDIIKSATVKSSLVGLKACVLSALTRRWRALCDRFRALTWTEPSHGSRSEAPINTRAR
ARSRILAKPCPLLVTAGRVLTRAGGKSISNPTPAPREKERRGTIGTSMGKGVLEVHLVDA
KGLSGSDFLGKLDPYVIVQYRSQERKSSVARDQGRNPCWNEVFKFQINSAAANAQHKLIL
RIMDHDNFSSDDFLGEATIDVTDIVGLGTERGTYHLNAAKHNVVLPDKTYHGEIKVGITF
TATQVQEDGGAIGGWRHSSFNQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaggaagttcttcgtgggcggcaactggaaatgcaacggcaccggcgaggac
gtgaagaagatcgtcaccgtcctcaacgaagccgaggtgcccactgaggacgtcgtcgag
gtggtggtgagcccgcctttcgtttttctgcagcaggtcaaggggctgctgcggctggac
ttcgctgtcgcagcgcagaactgctgggtgcgcaagggcggcgccttcaccggcgagatc
agtgctgagatgctggtgaacctgcaggtgccctgggtcattttggggcattctgagcgc
agagctctgttgggtgaatccagtgattttgttgctgataaagttgcatatgcactcacc
caaggtctcaaggtaattgcttgcattggtgagacccttgagcagagagaggcaggaacg
acaatggatgttgttgctgcacaaacaaaggctatttctgaaaaaatatcagattggaca
aatgttgtgttggcgtatgaaccagtttgggctattgggaccggcaaggttgcaacccct
gctcaggctcaggaggttcatgatggtctaagaaagtggcttcactccaatgttagccca
gcagttgctgaatcgaccaggataatttatggagggtctgtaaatggagctaactgcaaa
gaacttgcagctcaagcagatgttgatgggttccttgttggtggagcctcattgaagcct
gagttcgtggacatcatcaagtctgccactgtcaaatcttcattagtaggattaaaggcg
tgtgttctctctgctttaactcggcgatggcgagccttgtgcgaccgcttcagagctttg
acttggacagagcccagccatggcagccggagcgaggcgccgataaatacgcgcgcccgc
gcccggtcacgcatcttagctaagccttgtcccttgttagttacagccggtagagtattg
actagagcgggaggaaagagcatctccaatccaacgccggcgccgagggagaaggaaagg
aggggaacgatcggaacgagcatggggaagggcgtcctggaagtgcacctcgtcgacgcc
aagggcctctccggcagcgatttcttagggaagctggacccctacgtgatcgtgcagtac
cggagccaggagcgcaagagcagcgtcgcccgagaccaagggaggaacccgtgctggaac
gaggtgttcaagttccagatcaactccgccgcggccaacgcgcagcacaagctcatcctc
cgcatcatggaccacgacaacttctccagcgacgacttcctcggcgaggcgacgatcgac
gtgacggacatcgtcggcctgggcacggagcgcggcacgtaccacctcaacgcggccaag
cacaacgtggtgctccccgacaagacgtaccacggcgagatcaaggtcggcatcaccttc
accgccacgcaggttcaggaagatggaggagccattggaggatggaggcacagtagcttt
aatcagtga
DBGET
integrated database retrieval system
