Sorghum bicolor (sorghum): 8059354
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Entry
8059354 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase Smurf1
KO
K12865
polyglutamine-binding protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8059354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8059354
Spliceosome [BR:
sbi03041
]
Complex B
Other components
Prp19 complex
8059354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
WW_TCERG1
Hydrolase_2
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
8059354
NCBI-ProteinID:
XP_002458983
UniProt:
C5XG76
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All DBs
Position
3:complement(70964553..70969972)
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AA seq
490 aa
AA seq
DB search
MDNTQNQPLPPGVGTWPQAPPSHPPQCDADPQSYHPQFDTRPDNASANSSGSAANIESAV
QEAVLHAQDIETQQVIQNQRHANTTSEPTTYGEDLLSNRRDPSALKEHLLKMTADHRAEM
ASKRGKPLHPNNGNYEIGNGYGVPGGGAYYAANLPSAQMNKPRDETDKAKCANDLPDFLK
QRLRARGILKDETANKNNMSTQTVDSQQSQNKSAQELPHGWVEAKDLTTGAPYFYNQSTG
VSQWDRPGSVVNTMQHQVSPSLPENWEEAIDKSTGHKYYYNTKTQTTQWEPPSVSTSVTP
PASTNTAIEPVAQTADIWNSQMQRCLGCGGWGIGLVQPWGYCNHCTRVQNLPFQQYPSYT
SNTMHASGNNAPKTQGNVSAKDRSSSKPPLGKPNRKDHRKRNRPEDDELDPMDPSSYSDA
PRGGWVVGLKGVQPRAADTTAAGPLFQQRPYPSPGAVLRKNAEVATHGKKRGMAPITKRG
DGSDGLGEAD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggacaacactcagaatcaaccactaccacctggtgttggtacatggccgcaggctcct
cccagtcacccaccacaatgcgatgctgatccgcagtcttatcatccacaatttgacact
agacctgacaatgctagtgccaatagtagtggtagtgcagcaaacattgagtcagctgtc
caggaggctgttcttcacgcacaggacattgagacccagcaagtcatacagaatcaaaga
catgcaaacacaacaagtgaacctacaacatatggagaagacttactatcgaaccgccgt
gaccctagtgcgttgaaggagcacttactaaagatgacagctgatcatcgtgcagagatg
gcaagcaaaagggggaagccacttcatccaaacaatggcaattatgaaattggcaatggc
tatggtgtaccaggaggtggtgcttattatgctgcaaacttgccaagtgctcaaatgaat
aaacctagagatgaaactgataaagcaaaatgtgcaaacgatctccctgattttttgaag
cagaggttaagggcaaggggaattctcaaagatgagacagcaaataagaacaacatgagt
acacagaccgtggattctcaacaaagccagaacaaatctgcgcaagagttgcctcatggt
tgggttgaagcaaaggacctgacaactggtgcaccttacttctacaatcaaagcaccgga
gttagtcaatgggatcgccctggcagtgttgtgaataccatgcaacatcaagtttctcca
tccttgccagagaactgggaggaggcaattgacaaatcaacaggccacaaatactattat
aatacgaagacacagaccacacagtgggaacctccttctgtgagcaccagtgttacacct
ccagcttccaccaacactgcaattgagccagtcgctcaaactgcagatatttggaactct
caaatgcagagatgtctgggctgtggcggatgggggattggtcttgtccagccttgggga
tactgcaatcactgcacaagggttcaaaatcttccttttcaacagtatccatcttacaca
agtaatacgatgcacgccagtggtaacaatgctcccaaaactcaggggaatgtttcagct
aaggacagatcaagctcaaaaccgcccttagggaaaccaaacagaaaagatcaccgcaaa
aggaaccgccccgaggacgatgagcttgacccaatggacccaagttcttactcagacgct
ccacgcggtggctgggttgttggtttgaagggtgttcaaccacgagcagcagatactacc
gcagctggacctttgttccagcaaagaccatatccctcaccaggtgctgtgttgagaaaa
aatgcagaggtagcaacccatggcaagaaacgtggtatggctccgataacaaaaagagga
gatggcagcgatggacttggggaggcagattag
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