Sorghum bicolor (sorghum): 8060379
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Entry
8060379 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8060379 isoform X2
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00130
Ubiquinone and other terpenoid-quinone biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi01240
Biosynthesis of cofactors
Module
sbi_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
8060379
Enzymes [BR:
sbi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
8060379
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Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
8060379
NCBI-ProteinID:
XP_002453692
UniProt:
C5Y019
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Position
4:complement(14770702..14795949)
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AA seq
475 aa
AA seq
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MNLAVAAALPAVTPRSGVVLPRGGRRRGVVPLAASTSAASFTSSSSSAAAAAAPIYAPTP
QDRPLRTPHSGYHFDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDKLV
HGPRFTGVGAQILGADDKYICQFSEKSNNFWGSRHELMLGNTFIPNKESTPPQGEVPPQD
FSKRVLEGFQVTPIWHQGFIRDDGRSKYVPNVQTARWEYSTRPVYGWGDVKSKQLSTAGW
LAAFPFFEPHWQICMAGGLSTGWIEWDGERFEFENAPSYSEKNWGGGFPRKWYWIQCNVF
SGASGEVSLTAAGGLRKIGLGDTYESPSLIGIHYEGQFFEFVPWTGTVSWDIALWGRWKM
SGENKTHLVEIEATTTEPGTALRAPTIEAGLVPACKDTCYGDLRLQLWEKKYDGSKGAMI
LDATSNMAALEVGGGPWFNGWKGTTVTNEAVNNIVGTPIDVESLFPIPFLKPPGL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgccgtcgcagccgccctgccggccgtgacgccgcgttccggcgtcgtcctc
ccacggggcggccgccgccgcggggtcgtccctctcgcggcctcgacctcggcggcctcc
tttacctcctcctcctcctcggcggcggcggcggcggcgcctatctacgcgcccacgccg
caggaccggcctctccggacgccgcatagcgggtatcactttgacggcacagctcgacct
ttcttcgaaggatggtacttcaaggtgtcgattccagagtgcaggcagagtttctgcttt
atgtactctgtcgagaaccctctcttccgtgatggtatgagtgatttggacaagttggta
catggtccacgctttactggtgtgggagcacaaatccttggcgcggacgataagtacata
tgccagttctcagagaaatcaaacaatttttggggaagtaggcatgaactaatgctggga
aacactttcattcccaataaagagtcaactcccccacaaggggaggtgccccctcaggat
ttctctaagcgtgttttggaagggttccaagtcaccccaatctggcaccagggtttcata
cgtgatgatggaaggtcaaagtacgtgccaaatgtccaaacagctcgctgggagtacagc
actcgtccagtttatgggtggggtgatgtcaaatctaagcagttgtccacagctggttgg
cttgcagcttttcctttctttgaacctcattggcaaatatgcatggctggtggcttgtcc
acaggatggatagaatgggatggagaaaggtttgagtttgaaaatgctccatcttactca
gaaaagaactggggtggaggttttccaagaaagtggtattggatccagtgcaatgtcttc
tcaggagcttctggtgaagtttctttaactgctgctggtggattgaggaaaattggactt
ggtgatacctatgaaagtccttcactgattgggatacactacgagggacaattttttgaa
tttgtaccttggactggaacagtaagctgggacattgcactgtggggtcgttggaagatg
tctggcgagaacaaaactcatctggtagaaatagaggcaaccactacagaaccaggaact
gctctgcgagctcctactatcgaggctggactggtaccagcgtgcaaagacacctgctat
ggggatctaaggctacagttgtgggaaaagaaatacgatggtagcaagggagcgatgata
ctcgatgccacaagcaacatggccgcactagaagttggcggaggcccctggttcaatggg
tggaaagggacaactgttacgaacgaggctgtaaataacattgtgggcaccccaatcgat
gtagagagtctcttcccaatcccatttcttaagcccccaggcctgtag
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