KEGG   Sorghum bicolor (sorghum): 8065146
Entry
8065146           CDS       T01086                                 
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8065146
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    8065146
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 8065146
NCBI-ProteinID: XP_002464356
UniProt: C5WVB2 A0A921RYB2
LinkDB
Position
1:16978637..16991827
AA seq 888 aa
MSLNRLKETLNACSSSFSQPQTQPRSPPHHPALLPRRPPKTSLSQQLLRLEAAASSSSSS
SFSSRPVQLPPVPRSPIQKPREVDEPPSSEDEDERKSRPIIRRCQPPPPPAALESRGPFE
PLVLSLPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGILGDDMGLGKTIQTIA
FLSSVIGKGNGHEQSTNKGKKIGPVLILCPTSVIRNWENEFSEWAEFSVAVYHGPNRDLV
LGKIETQGLEVLITSFDTFRIHDKILCGISWELVVVDEAHRLKNEKSKLYTACLGITTQK
RFGLTGTIMQNKIMELFNLFDWVVPGCLGDREHFRAYYDEPLKQGQRLSAPERFVQVADA
RKKHLVSVLRKFLLRRTKEETIGHLMLGKEDNIVFCKMSDVQKRVYRRMLQQPDIQILIN
RDVPCSCGSPLPQVECCKRTEPAGVIWSYLHRDNPDEGCSICPFCLVLPCLVKLQQISNH
LELIKPNPKDEPEKQKKDAELAAAVFGADIDLVGGTAKSENFMGLSDAEHCGKMRALERL
LSLWTQQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQSLVDEFNRSPSK
QVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRYGQRRHVTVFRLLGAGS
LEELIYSRQIYKQQLSNIAVSGKIERRYFEGVQDDKKFQGELFGICNLFRDLSDKLFTSE
IIEMHGEHGKSSATEATGIREIVDTDLFGSQENRKSSTTTTDTDNEKLVDFGIVYAHRNE
DVVNSRTNEREKGGTDKTLQSSLEELHSKNETKHTVMEKSYSLEEKRKVARSYSLEQKRK
EFSRIASFMGMDDLEFSKWLLSASPHQRSEVLQNYKRKKKRKCEKKQK
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgtccctcaaccgcctcaaggaaaccctcaacgcctgctcctcttctttctcccaacca
cagacccaaccgcgctcaccgccgcaccaccccgctctccttccgcggagacccccaaag
acgtccctttcgcagcagctcctccgcctcgaggccgccgcctcttcctcctcctcctcc
tccttttcctccaggcccgtacagctcccacccgtccccaggtccccgatccagaagccg
cgggaggtcgatgaaccgccgtcgtcagaggacgaggacgagagaaaaagtcgccccatt
atccgccgctgccagcctccgccaccaccggccgccctcgagtcccgcgggccattcgag
ccacttgtgctctcgctgcctggagaacaccctgtcgtccaggtgcccccatcaataaat
tgtaggctacttgcgcatcagagggacggtgtgagattcttgtacaatttgtatagaaac
aatcatggcggtattcttggagatgacatgggtttgggaaagaccattcaaactattgct
tttctatcttctgttattggaaaaggcaatggccatgagcaatcaacaaacaaaggaaag
aaaattggccctgtactcatcctctgccctacttcggtgattcggaactgggaaaatgaa
ttttctgagtgggcagaattctctgttgctgtctatcatggtccaaatcgtgatttggtt
cttggaaaaattgaaactcaaggactggaggtactcattaccagttttgacactttcaga
attcatgacaagattttatgtggtatctcgtgggaacttgtggttgttgatgaggcacat
cgtctcaagaatgaaaaatccaagttatatacagcatgcttggggataacaactcaaaag
cggtttggtctcacagggaccataatgcaaaataagattatggaattatttaatctattt
gactgggtcgtgcctggctgcttaggggatcgagaacactttcgagcctattatgatgag
cctctaaaacagggtcagaggctaagtgctcctgagagatttgttcaagttgctgatgca
cgcaagaagcaccttgtttccgttcttaggaaattcttattgagaagaacaaaagaggag
acaattggacatcttatgcttgggaaggaggataatattgttttctgcaaaatgagtgat
gttcaaaaacgtgtttatagaagaatgctgcaacaacctgacatacagatccttattaat
agggatgtaccctgtagctgtggaagtcctttacctcaggttgaatgttgcaagagaact
gaaccagctggtgttatatggtcttatcttcacagagacaaccctgatgaaggctgttct
atatgccccttctgtcttgttcttccttgcctcgtcaagcttcagcagattagcaaccat
ctggagctgataaaacctaatccaaaggatgagcctgaaaagcagaagaaagatgctgaa
cttgcagctgctgtcttcggtgcagatattgacttagttggtggtaccgctaaaagtgaa
aacttcatgggtctcagtgatgctgaacattgtggaaagatgcgagcactagaaaggctt
ctgtcactgtggactcagcagggtgacaagattcttcttttcagttattctgtcaggatg
cttgacatactagagaagtttctcataaggaagggttattgcttttcacgctttgatgga
acaactcccatgaatgcacgccaatcactagtggatgagttcaacagaagccctagcaaa
caggttttccttatatctactcgggcaggtaatttaggtgtaaaccttgttagtgctaac
cgtgtggtgatatttgatccaagttggaatcctgcccaagacttgcaagcacaagacaga
tcatttcggtatggacagagacggcatgtcacagtatttcgcctacttggtgctggttca
cttgaagagctcatttattcacgacagatatataaacagcagctttccaacattgcagtc
tctggaaaaatagagagacgttattttgaaggcgtgcaggatgacaagaaatttcaaggt
gagctctttgggatctgcaatcttttccgtgacttgtccgataagctttttactagtgag
attattgagatgcatggagaacatggcaagagtagtgcaacagaagcaacagggataaga
gaaatagtcgatactgatttatttggttcacaagagaataggaagtcttccacaacaaca
acagatacggataatgagaaattggttgattttgggatagtttatgcccaccgcaacgag
gatgttgtgaactctcgaacaaacgaaagagagaagggtggaacagacaagactcttcag
agctccttagaggagctgcacagtaagaatgaaacaaagcacactgtcatggaaaaatct
tattcactggaggagaaaagaaaagtggcaagatcttattcgctggagcagaaaaggaaa
gagtttagccgtatcgcatccttcatgggtatggatgaccttgaatttagcaagtggttg
ctatcagcctcaccacaccagcggtccgaagtgctgcagaactacaagaggaaaaagaag
cggaagtgtgagaaaaaacagaaatga

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