KEGG   Sorghum bicolor (sorghum): 8065700
Entry
8065700           CDS       T01086                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    8065700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8065700
Enzymes [BR:sbi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     8065700
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     8065700
 Prokaryotic type
     8065700
SSDB
Motif
Pfam: HhH-GPD USP47_C
Other DBs
NCBI-GeneID: 8065700
NCBI-ProteinID: XP_002438135
UniProt: C5Z7I0
LinkDB
Position
10:complement(8897451..8901677)
AA seq 279 aa
MPPKIKRKAPASPARHDPSPEPYPSHASPSSAQCLAVRDALLAFHGFPEEFAPFRLLRLG
GRSPNRDPRPQPLSPTVLDGLVITLLSQNTTDAISRRAFASLKAAFPSWDQVVDEEGKRL
EDAIRCGGLATTKAARIRAMLRDVRERRGKICLEYLRELSVDEVKKELSRFKGIGPKTVA
CVLMFYLQKDDFPVDTHVLRITKAMGWVPATASREKAYIHLNNKIPDDLKFDLNCLFVTH
GKLCQSCTKKVVSDKSKNSNAACPLAGYCCIGEEKLQQQ
NT seq 840 nt   +upstreamnt  +downstreamnt
atgcctccgaagatcaagcggaaggctccggcctcaccggcgaggcacgacccttcgccg
gagccctacccttcccacgcctccccctcctcggcacaatgcctggcagtccgcgacgcc
ctcctcgcgttccacgggttccccgaggagttcgcgcccttccgcctcctccgcctcggt
ggccgctcgcctaaccgtgaccctcggcctcagcctttgtctcccacagtgcttgacggc
ctcgtcatcaccctcctctctcagaacactaccgacgccatctcgcgccgcgccttcgcc
tccctcaaggccgctttcccctcctgggaccaggtggtggatgaggaagggaagaggctg
gaggacgccatccggtgcggcggcctggcgacgacgaaggcggccaggatacgggccatg
ctgagggacgtgagggagcggaggggcaagatttgcctcgagtacctgcgggagctgtcg
gtggatgaggttaagaaggagctctctcggttcaaagggattggaccaaagaccgtggca
tgtgtgctgatgttctatctacagaaggatgattttccagtggatactcatgtactccgc
attacaaaggctatgggttgggttcctgcaacagctagcagggagaaggcctacattcat
ctaaataataagattcctgatgatctgaagtttgatttgaattgtctttttgtaactcat
gggaagctttgtcagtcatgtaccaaaaaggtggtaagtgataaaagcaagaattccaat
gctgcctgtcctctagcaggttactgttgcattggagaagaaaagcttcagcaacagtga

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