Sorghum bicolor (sorghum): 8065835
Help
Entry
8065835 CDS
T01086
Name
(RefSeq) putative lipoxygenase 5
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00591
Linoleic acid metabolism
sbi00592
alpha-Linolenic acid metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
8065835
00592 alpha-Linolenic acid metabolism
8065835
Enzymes [BR:
sbi01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
8065835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
8065835
NCBI-ProteinID:
XP_002446554
UniProt:
C5Y999
LinkDB
All DBs
Position
6:46566597..46571057
Genome browser
AA seq
924 aa
AA seq
DB search
MASAMELVGRSFLPGSAAAASPAGRERRRGGPCFAAVGREGSAHKRRPSLRSTAPVGALA
ERVVVTPAPPEERAGTAPPEPHPQSVAARAVVTVRRRRKEDAKRRVAEQLDAYADRVGRS
VLLELISTETDPRKGGPKKSRRSALVGWFEKKDVKAERVVYTADFTVDGCFGEPGAVTVL
NRHQREFFIESIVVEGFPSGPAHFTCNSWVQPTRVDRNPRVFFTNKPYLPAETPPGLQEL
RRQELSDLRGEGGADTTGERRITDRVWEYDVYNDLGNPDKGAEFARPILGGEQQLPYPRR
MRTGRPKTFTDDRAESRVEYPEPIYVSRDEEFEEGKNEMLSEGALKALLHNFMPLLVSSV
SPDIRDFAGFHDVDNLFKEGLRLKQALQDQLFQKIPFVRKIQENSEGLLRYDTPDIIKKD
KFAWLRDDEFARQALAGINPVNIERLQAFPPMSKLDPAVYGPPESAITEEHIIGQLDGMS
VRQALQDNRLYMLDYHDIFLPFLDRINAQDGRKAYGTRTLFFLTAAGTLKPIAIELCLPP
MTDGCARAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIISAH
RQLSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTPGRYCMEMSSFAYQELW
RLDQEGLPADLIRRGMAVEDPTQPHGLRLLIEDYPYATDGLLLWDAITRWCDAYVAMYYP
SDQAVQGDTELQSWYREAVQTGHADKRGAPWWPRLSTPGDLASLLTTLLWLTSAQHAALN
FGQYPLGGYIPNRPPLMRRLVPADGDPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTL
STHSADEQYLGERPDEAWTADPAALAAAREFADEVRRAEEEIDRRNADTGRRNRCGAGVL
PYELMAPTSGPGITCRGIPNSVTI
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgatggagctggttgggagatctttcttgccgggctctgccgccgcggcg
tcgccggcgggccgggagcggcggcgaggcgggccctgcttcgccgcggtcggaagggag
gggagtgcgcacaagcggcggccgtcgctgaggtcgaccgcgccggtgggcgcgctggcc
gagcgcgtcgtggtgaccccggcgccgccggaggagagggccgggacggccccgccggag
ccgcacccgcagagcgtggccgcgcgcgccgtggtcaccgtgcggcggaggcgcaaggag
gacgccaagcgccgcgtcgccgagcagctggacgcctacgccgacagggtcggccgcagc
gtcctcctcgagctcatcagcacggagaccgacccaagaaaagggggccccaagaagagc
cggcggtcggcgctggtggggtggttcgagaagaaggacgtcaaggcggagcgggtggtg
tacacggcggacttcaccgtcgacgggtgcttcggcgagcctggcgccgtcaccgtgctc
aaccggcaccagcgcgagttcttcatcgagagcatcgtggtggagggctttccctcgggc
cccgcgcacttcacctgcaactcgtgggtgcagcccacccgcgtggaccgcaacccgcgc
gtgttcttcaccaacaagccctacctgccggccgagacgccgccggggctgcaggagctc
cgccgccaggagctcagcgacctgaggggcgagggcggcgccgacaccaccggcgagcgc
aggatcaccgaccgggtgtgggagtacgacgtgtacaacgacctcggcaacccggacaag
ggcgccgagttcgcgcgcccgatcctcggcggcgagcagcagctgccgtacccgcgccgg
atgcgaacgggccggcccaagaccttcacagacgatcgcgcggagagcagggtggagtac
ccggagcccatctacgtgtcccgggacgaggagttcgaggagggcaagaacgagatgctg
tcggagggcgcgctcaaggcgctgctccacaacttcatgccgctgctggtgagctccgtg
tcgccggacatccgcgacttcgccggcttccacgacgtggacaacctcttcaaggagggc
ctccggctgaagcaggcactgcaggaccagctgttccagaagatccccttcgtgcgcaag
atccaggagaacagcgagggcctcctccgctacgacacgcccgacatcatcaagaaggac
aagtttgcgtggctgcgcgacgacgagttcgcgaggcaggcgctggctggcatcaacccc
gtcaacatcgagcggcttcaggcgttcccgccgatgagcaagctggacccggccgtgtac
ggcccgccggagtcggccatcacggaggagcacatcatcgggcagctggacggcatgtcg
gtgcggcaggcgctgcaggacaaccggctgtacatgctggactaccacgacatcttcctg
ccgttcctggaccggatcaacgcgcaggacgggcggaaggcctacggcacgcgcacgctc
ttcttcctgacggcggcgggcacgctcaagcccatcgccatcgagctgtgcctgccgccc
atgaccgacgggtgcgcgcgcgccaagcgggtgttcacgccgcccgccgacgccaccagc
aactggctgtggcagctcgccaaggcgcacgtctgctccaacgacgccggcgtccaccag
ctcatcaaccactggctgaggacgcacgcgtgcatggagccgttcatcatctcggcgcac
cggcagctgagcgcgatgcaccccatcttcaagctgctcaagccgcacatgcgctacacg
ctcaagatcaacgcgctggcgcggcagatcctcatcaacggcgacggcgtcatcgagtcc
ggcttcacccccggccgctactgcatggagatgagctcgttcgcgtaccaggagctctgg
cggctcgaccaggagggcctccctgccgatctcatcagaagaggaatggccgtggaggac
ccgacgcagccgcacggtctccggctgctgatcgaggactacccgtacgccaccgacggg
ctgctcctctgggacgccatcacgcggtggtgcgacgcgtacgtggccatgtactacccg
tccgaccaagccgtgcagggcgacacggagctgcagtcgtggtacagggaggcggtgcag
acggggcacgcggacaagcgcggcgcgccgtggtggccgcgcctgtcgacgccgggcgac
ctggcgtcgctgctcaccacgctgctgtggctcacctcggcgcagcacgcggcgctcaac
ttcgggcagtacccgctgggcggctacatcccgaaccgaccgccgctcatgcggcggctg
gtgcccgccgacggcgacccggagtacgcgcacctggtggccgacccgcaccgcttcttc
ctgtcggcgctgcccagcctgacgcagacgaccaccttcatgaccgtcatcgacacgctg
tccacgcactccgccgacgagcagtacctcggggagcggcccgacgaggcgtggacggcc
gacccggcggcgctggcggcggcgcgcgagttcgcggacgaggtgcgccgcgccgaggag
gagatcgaccggcgcaacgcggacacgggacgccgcaaccggtgcggcgccggcgtgctg
ccgtacgagctcatggcgcccacgtccgggccgggcatcacctgccgcggcatccccaac
agcgtcaccatttag
DBGET
integrated database retrieval system
