Sorghum bicolor (sorghum): 8082015
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Entry
8082015 CDS
T01086
Name
(RefSeq) probable lipoxygenase 6
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00591
Linoleic acid metabolism
sbi00592
alpha-Linolenic acid metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
8082015
00592 alpha-Linolenic acid metabolism
8082015
Enzymes [BR:
sbi01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
8082015
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
8082015
NCBI-ProteinID:
XP_002468402
UniProt:
C5WVT3
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All DBs
Position
1:complement(75467057..75473497)
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AA seq
924 aa
AA seq
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MAAPCRELAGLRRGPAAARPPVPGRRGANELCLAPFHHRAPQQQRQRQRRGRGLKVVAAI
SEDLPRLAAPGTGTGNKGAAEGRRPEKVLVRAALTVRRKHKEDLKEAMAGHLDALWDMVG
RSVALELISTKIHARTKKPLQSGQASIKDWCQKRGVKGEHVVYTAEFMVDSDFGEPGAIT
VANRHHREFFLESIVVEGGLPCGPVHFACNSWVQSTRELPGKRVFFSNKPYLPSETPPGL
RELRDKELKDLRGDGTGVRKLSDRIYDYAMYNDLGNPDRGKEFTRPILGGDKIPYPRRCR
TGRPPTDTSMMAESRVEKPHRIYVPRDEAFEELKQGAFSSGRLRAVLHTLIPSMIATISA
ETHSFQGFHHVDNLYKEGLRLKLGLQEHLFQKIPLVQKIQESSEGMLRYDTPRILSKDKF
AWLRDDEFARQTVAGINPVSITRLTVFPPVSKLDPAIYGSPESSITEAHIAGQLNGLTVQ
QAVDEAKLFILDYHDAYLPFLDRINAIEGRKAYATRTILFLTKAGTLKPIAIELSLPPSK
AGQPQPSKVLTPPSDATSNWLWMLAKAHVSSNDAGVHQLVNHWLRTHAIMEPFILAAHRR
MSAMHPVFKLLHPHMRYTLEINALARQSLISADGVIESCFTPGPVSFEISAAYYHNHWRF
DLEGLPSDLVRRGVAVEDASQPHGIRLLIEDYPYANDGLLLWSAIRNWVESYVQLYYPDA
GTVQSDDELQGWYHETVHVGHADIRHAPWWPSLSTPADLASILTTLIWLASAQHAALNFG
QYPLGGYVPNRPPLMRRLLPDPERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTL
STHSPDEEYLGEGRDEPWTGDAAAVAAHAMFEADVRRAEEAIETRNADQRRKNRCGAGVL
PYELLAPSSPPGVTCRGVPNSISI
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccatgcagggagctcgcgggccttcgccgggggccagccgcggcgaggccg
ccggtgccgggccgccggggcgcgaacgagctctgcctcgcgccgttccaccaccgcgcg
ccgcagcagcagcggcagcggcagcggcgggggcgggggctcaaggtggtggcggccatc
agcgaggacctgccgaggctcgcggcgcccgggaccgggaccgggaataagggcgcggcg
gagggcaggcggcccgagaaggtgctggtgcgggccgcgctcacggtgcgccgcaagcac
aaggaggacctcaaggaggcgatggccggccacctcgacgcgctctgggacatggtcggc
cggagcgtcgcgctcgagctcatcagcaccaagatccacgccaggaccaagaaaccgttg
cagagcggtcaggcgtcgatcaaagactggtgtcagaagaggggtgtcaagggagagcac
gtcgtgtacacggctgagttcatggtggattcagacttcggcgagcccggcgccatcacc
gtggccaaccggcaccaccgggagttctttctggagagcatcgtcgtcgagggtgggctg
ccgtgtggtccggtgcactttgcctgcaactcttgggtgcagtccaccagggaattgccg
ggaaagagggtgttcttcagtaacaagccgtatttaccatctgaaacaccacctggactt
agagaactaagggataaggagctgaaggaccttagaggagacggcacaggagtacgaaag
ttatctgacagaatatatgattatgcaatgtacaatgatttggggaatccagatcgggga
aaagagttcaccaggccaatccttggaggtgacaagatcccttacccacggcgatgccga
actggtcgtccaccaactgataccagcatgatggctgagagcagagtagagaaaccacac
cggatatacgtacctcgggatgaggcatttgaggagctgaagcaaggtgccttctcatca
gggaggctgcgggcagtacttcacacccttatcccatcgatgattgcaaccatctcagct
gaaacccacagcttccaaggtttccaccacgttgataatctctacaaggagggcctcagg
ctgaagttgggtctccaggagcacctgttccagaaaataccccttgttcagaagattcag
gaatcaagtgaggggatgcttcgctatgatacacctagaattctttccaaggacaagttt
gcatggctccgtgatgatgagtttgctcggcagaccgttgcaggaataaacccagttagc
atcaccaggctcacggttttcccaccagtgagcaagttggatcctgcaatctatggctca
ccagaatcatcgatcacagaagcgcacatcgctggtcagctcaatggactcacagtacaa
caggcagtggacgaggcaaagctgttcatattggactaccatgatgcctacctgccattc
ttggaccggattaatgcaatagaggggcggaaggcatatgcaacccgcacaatcttgttt
cttaccaaagctggcacattgaaaccaattgctattgaacttagccttcctccaagcaag
gcaggccagccccaaccaagcaaagtccttactcctcccagtgatgctacctccaattgg
ctatggatgcttgccaaagctcatgttagctccaatgacgccggtgttcaccagctcgtt
aatcactggctgaggacacatgctataatggagccattcatattggcagcgcatcggcga
atgagtgcgatgcacccagtcttcaagctcctacacccccacatgcggtacactctggag
atcaatgcgcttgcacggcagagcctgatcagtgcggacggtgtcatcgagtcatgcttc
acccctggccctgtttccttcgagatcagcgctgcttactaccacaaccactggcggttc
gacctggagggcctcccttctgacctcgtccgcaggggagtggctgtggaggatgcgtcg
cagcctcacggcatcaggctcctcatcgaggactacccttacgcgaacgacgggctcctg
ctgtggtcggccattcgcaactgggtggagtcgtacgtgcagctctactacccggacgcc
ggcaccgttcagtccgacgacgagctccaagggtggtaccacgagacggtccacgtcggg
cacgccgacatccggcacgcgccctggtggccctcgctctccacgccggcggacctcgcg
tccatcctgacgacgctcatctggctcgcgtcggcgcagcacgcggcgctcaacttcggg
cagtacccgctgggcgggtacgtgccgaaccgcccgccgctgatgcgtcggctgctgccg
gacccggagcgcgacgcggccgagtacgcggcgttcctggcggacccgcaccggttcttc
ctgaacgcgatgcccggggtgctggaggccaccaagttcatggcggtggtggacacgctg
tcgacgcactcgcccgacgaggagtacctcggcgaggggcgcgacgagccgtggacgggc
gacgcggccgccgtggcggcgcacgccatgttcgaggccgacgtgcgccgcgccgaggag
gccatcgagacgcggaacgcggaccagcgcaggaagaaccggtgcggcgccggcgtgctg
ccgtacgagctgctggcgcccagctcgccgccgggggtcacgtgccgcggcgtgcctaac
agcatctccatatga
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