Sorghum bicolor (sorghum): 8084151
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Entry
8084151 CDS
T01086
Name
(RefSeq) transcription factor PIF5 isoform X2
KO
K16189
phytochrome-interacting factor
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8084151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8084151
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
8084151
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
8084151
NCBI-ProteinID:
XP_002466350
LinkDB
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Position
1:complement(5229457..5233565)
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AA seq
424 aa
AA seq
DB search
MDGNARSSAANQKKPIVADDDLIELLWHNGSVVAQPQAHHRPAPAPAPPPSDRDRPAGAS
GLTGEETAAWFPDTLDDALEKDLYTHLWYSTIADAAPQHEGTLLATPQPSPPPPLPVGSS
GVESSWAGDICSTFCGSNQVPRTPAGTSRKDAALQSAGTSGAGGHDGTSSSGGSGSNYGG
SGLPSDSVHVHKRKGRCRDDSDSPSEDAECEEATEETKPSRRHGPKRRTRAAEVHNLSER
RRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMAPMMFPGA
HQFMPPMALGMNSGCIPAAQGLSQMPRLPYMNHPLPNHIPLNSSPAMNPLNAANQMMQNG
HLREASNHFLHLDGRTAVVPQVPGPHVYGHQIAQAEEPNSILEVAASTVVPTSRAGQPPS
FDGV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaatgcgaggtcgtcggcggcgaatcagaagaagcccatcgtcgcggacgac
gacctcatcgagctgctgtggcacaacgggagcgtcgtcgcgcagccccaggcgcaccac
aggccggcgccggcgccggcgccgccgccctccgaccgcgaccgcccggctggcgccagc
ggcctcaccggcgaggagaccgccgcgtggttcccggacaccctcgacgacgccctcgag
aaggacctgtacacgcatctctggtacagcaccatcgccgacgccgccccgcaacacgag
ggcacgctcctggctaccccgcagccgtcgccgccgccgccgctgccggttgggagcagc
ggcgtcgagtcgagctgggccggcgacatctgctccaccttctgcggcagcaaccaggtg
cccaggacgccggcagggaccagcaggaaggacgctgcattgcagtcggcagggaccagc
ggtgccggcgggcacgacggcacatcgtcgtccggtgggtctggaagcaactatggggga
tccgggctgccaagtgacagcgtccatgtccacaagaggaaggggaggtgtagagacgac
tcagatagtccgagtgaggatgccgagtgtgaggaggcaactgaggagaccaaaccgtcg
cggcgacatgggccgaaacgccggactcgtgcagctgaagttcataatctctcagagagg
agaagaagggacaggatcaatgaaaagatgcgcgcgttgcaagagctgatcccgcactgc
aacaagactgacaaagcgtcgatattagatgagacgattgagtatctcaagtccctccaa
atgcaagttcagatcatgtggatgacttctgggatggcaccaatgatgtttcctggtgct
caccaattcatgccaccaatggctctaggcatgaattcaggttgcatccctgcagcgcaa
ggcctaagtcagatgccaagattaccatacatgaaccaccccctgccaaatcatatccct
ctgaactcatctccagctatgaatccactgaatgctgcgaaccagatgatgcaaaacggt
cacctcagggaggcaagtaatcacttccttcacctagatgggcgaacagcggtggtacct
caggtaccaggaccccatgtttatggacatcaaatagcacaagccgaagaacccaatagt
atactggaagtggctgctagtactgttgtgccaacttctagggcagggcaaccacctagt
tttgatggagtttag
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