Sorghum bicolor (sorghum): 8086399
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Entry
8086399 CDS
T01086
Name
(RefSeq) transcription factor PIF5
KO
K16189
phytochrome-interacting factor
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8086399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8086399
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
8086399
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
8086399
NCBI-ProteinID:
XP_021308074
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Position
2:2831373..2835393
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AA seq
509 aa
AA seq
DB search
MPRAQRDDCPVRAPPLSTFQPVVSFISLRRLRSEHRRYYPLFTIHTYSKLQLQHSSIHPS
IQEEVASRYLGASGSRKWLLAMDGGERPATTSHKAPHPFVPDGELVELLWQDGAVVAHSQ
AQAHHHHHHHYRRPLVQVAAGNTGASGVTGEQAPALPWLPCSGGAMGGDVYSQLWQSIAQ
ADGRVVGADAVAGAPRPPARSGNSGVGSSRTAGQEVGSSFSGSNLVAAAMHLDDDIDDVG
VAAALPVPLDDPATATGAGAGASTSSGWNSNAPLHKRSRDEFDEDADLDTVDETPPSSRD
RRPASNKRRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSL
QMQVQIMWMSTGMAPMMIPGAHQLMPPMTMGLNSARMPPPAVQFLSQMQRVPPHFMNNPL
LNQMPQMLPPPTNAPNVTDQAQSNRMALPRNPFLHPNDSDALTTPHQVPSLFGYGPQMVQ
VNEIQELLTSTAAPALGTDLPSSSDGTGA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagctcagcgagacgactgtcctgtgcgtgctccgcctctttccactttccaa
cccgtggtttcattcatcagtttgcggcgcctccgatcggagcaccgccggtattatcca
ttattcactattcatacatacagcaagttgcagttgcagcacagctccatccatccatct
atacaagaagaggtagcaagcaggtatctgggcgcctccggctccaggaagtggctgctc
gccatggacggcggcgagaggccggcgacgacgagccacaaggcgccgcaccctttcgta
ccggacggcgagctcgtggagctgctgtggcaggacggcgctgtcgtggcgcactcacag
gcgcaggcgcaccaccaccaccaccaccactaccggcggccgctggtccaggtcgccgcc
ggcaacacgggcgccagcggcgtcaccggggagcaggcgcccgcgctgccgtggctcccg
tgcagcggcggtgcgatgggcggggacgtgtactcgcagctctggcagagcatcgcgcag
gccgacggccgcgtggtgggcgccgacgccgtggcgggcgcgccccggccgcccgccagg
agcgggaacagcggcgtcgggtccagccggacggccgggcaggaggtcggctccagcttt
agcggcagcaaccttgtcgccgcggcgatgcacctggacgacgacatcgacgacgtcggc
gtcgccgccgcgctgcccgtgccgctggacgacccggccacggccacgggcgccggtgcc
ggcgcgtccacgtccagcggctggaacagcaatgcgccgctgcacaagaggagcagggac
gagttcgacgaggacgccgacttggacaccgtcgacgagaccccgccgtcgtcgagggac
aggcggccggcgtccaacaagcgcaggacgcgcgcagccgaggtccacaacatgtctgag
cggaggagaagggaccggatcaacgaaaagatgcgagctctgcaggaactcgtgcctcac
tgcaacaagactgacaaagcgtcgatactagatgaggcaattgagtacttgaagtccctc
caaatgcaggttcagatcatgtggatgtctactgggatggcgccgatgatgatccccggt
gctcaccagctcatgccgccgatgaccatgggcttgaattcagcgcggatgccgccaccg
gctgtgcagttcctgagccagatgcagagggtaccaccacactttatgaacaacccgttg
ctgaatcagatgcctcagatgttaccccctcctacaaatgcacccaatgtaactgaccaa
gctcaaagcaaccgcatggcactgccgagaaatcccttccttcatcctaatgatagtgat
gcactgacaacaccgcatcaggtgccaagtttatttggctatggaccacagatggtacag
gtgaatgagattcaagagctactgaccagcactgcagcgccggctttggggaccgaccta
ccgtcatcctctgatggaactggagcataa
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