KEGG   Syngnathoides biaculeatus (alligator pipefish): 133490789
Entry
133490789         CDS       T09681                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010  MAPK signaling pathway
sbia04137  Mitophagy - animal
sbia04141  Protein processing in endoplasmic reticulum
sbia04210  Apoptosis
sbia04217  Necroptosis
sbia04621  NOD-like receptor signaling pathway
sbia04622  RIG-I-like receptor signaling pathway
sbia04920  Adipocytokine signaling pathway
sbia05132  Salmonella infection
sbia05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133490789
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    133490789
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    133490789
  09143 Cell growth and death
   04210 Apoptosis
    133490789
   04217 Necroptosis
    133490789
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    133490789
   04622 RIG-I-like receptor signaling pathway
    133490789
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    133490789
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    133490789
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133490789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbia03019]
    133490789
   04121 Ubiquitin system [BR:sbia04121]
    133490789
Enzymes [BR:sbia01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133490789
Messenger RNA biogenesis [BR:sbia03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     133490789
Ubiquitin system [BR:sbia04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    133490789
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF3_RING TRAF2_zf zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_6 ATG16 DUF4795
Other DBs
NCBI-GeneID: 133490789
NCBI-ProteinID: XP_061657263
LinkDB
Position
17:complement(20926770..20941341)
AA seq 593 aa
MAAQEPSPPSSMESNKPGLPKKILGNKLEDKHLCKSCHNILRRPFQAQCGHRFCSYCFNL
AISNGPQKCNACIKEDIFEEATSILKQGCAFPDNAVRREVENLTAVCVNESCSWRGSVKD
YELNHEGKCEFMIVPCPSCKERIRFNDQERHSERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKYCSKFRMPCRFHVVGCDMSVEKEKTHDHERAFA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLVELQQSLRELEARVSQLSTTSSSSCGP
PVQGAGASSSSGSGPPAPLPPPPALAPALSVSTSFTPLPSSVGAALELQLHSEKTKVAEL
GRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLERTV
GLKDLTVAEMEGRLREISATTFDGVFVWRISDFAKKRQDAVAGRAPAMFSPAFYTSKYGY
KMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIIDAFR
PDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggccgcccaggagccttcgccgccgtcgtccatggagagcaacaagccgggcctcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaagtcctgccacaacatc
ctgcggcgacccttccaggcgcagtgcggccaccgcttctgctcgtactgcttcaacctg
gccatcagcaacgggccgcagaaatgcaacgcctgcatcaaggaggacattttcgaagag
gccacgtcaatcctgaaacaaggatgcgcttttcccgacaacgccgtccggcgggaagtg
gaaaacctcacggccgtctgcgtgaacgaaagctgctcttggaggggatccgtcaaagat
tacgagctgaaccacgagggcaagtgcgagttcatgatcgtcccgtgcccgtcctgcaag
gagcgcatccgcttcaacgaccaggagcgccacagcgagcgcgagtgcccggagaggacg
ctcaactgcaagtactgcaaggaaccttttcacttcaagaacatcaaggctcacgacgag
atctgccctaaatacccgatgatctgcgaaggctgcgccaaaaagaagataccgagggag
aagtacgtggaccacatcaagtactgcagcaaattcaggatgccgtgtcgctttcacgtc
gtgggctgcgacatgtcggtggagaaggagaagacccacgaccacgagcgagcgttcgct
tacgagcacctcaacctgctgctgcactacatcatgggcatgaaggtgagcatggagggg
ctgcagccgcagggtctggaggtggcggggcacaaactggtggagctgcagcagtccctc
agggaactggaggcccgggtctcccagctcagcaccacctcctcctcctcctgcgggcct
cccgtgcagggagccggcgcctcctcgtcctccggctctggcccgccggctcccctgccc
ccgcctcccgctctggcccccgccctgtccgtgtccacctccttcacgcccctgcccagc
tcggtgggcgcggccctggaactgcagctccacagcgagaagaccaaggtggccgagctg
ggccgccgctgcaccgagctggaggtgaaggcgggcaccttcgagaacgtggtgtgcgtc
ctgaacagagaggtggagcgcttcgccaccaccatggaggccagcaaccgccagcacaag
ctggaccaggacaagatcgaggctctgagtaacaaggtgcggcagctggaaaggacggtg
ggcctgaaggacctgacggtagcggagatggagggtcggctaagggaaatatccgccacc
acgttcgacggcgtctttgtgtggaggatctcggattttgccaaaaagaggcaggacgcc
gttgccggtcgggcccctgccatgttctcgccagctttctacaccagcaaatatggctac
aaaatgtgtctgcggatctatctgaacggggacgggacggggcgcggcagccacttgtcc
ctgttctttgtggtgatgcggggactcagcgacgcgctgctcaagtggcccttcaaccag
aaggtgaccctgatgctgctggaccagagcaaccgggagcacatcatagacgccttccgg
cccgacgtcacctcgtcgtccttccagcggcccgtgagcgaaatgaacatcgccagcggc
tgcccgctcttctgcccgctctccaaactggacgccaaaaactcttacatccgcgacgac
accatcttcatcaaggccatcgtggacctcaccgggctctag

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