Syngnathoides biaculeatus (alligator pipefish): 133490789
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Entry
133490789 CDS
T09681
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04137
Mitophagy - animal
sbia04141
Protein processing in endoplasmic reticulum
sbia04210
Apoptosis
sbia04217
Necroptosis
sbia04621
NOD-like receptor signaling pathway
sbia04622
RIG-I-like receptor signaling pathway
sbia04920
Adipocytokine signaling pathway
sbia05132
Salmonella infection
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133490789
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133490789
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133490789
09143 Cell growth and death
04210 Apoptosis
133490789
04217 Necroptosis
133490789
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133490789
04622 RIG-I-like receptor signaling pathway
133490789
09152 Endocrine system
04920 Adipocytokine signaling pathway
133490789
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133490789
09171 Infectious disease: bacterial
05132 Salmonella infection
133490789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133490789
04121 Ubiquitin system [BR:
sbia04121
]
133490789
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133490789
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133490789
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
133490789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF3_RING
TRAF2_zf
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
ATG16
DUF4795
Motif
Other DBs
NCBI-GeneID:
133490789
NCBI-ProteinID:
XP_061657263
LinkDB
All DBs
Position
17:complement(20926770..20941341)
Genome browser
AA seq
593 aa
AA seq
DB search
MAAQEPSPPSSMESNKPGLPKKILGNKLEDKHLCKSCHNILRRPFQAQCGHRFCSYCFNL
AISNGPQKCNACIKEDIFEEATSILKQGCAFPDNAVRREVENLTAVCVNESCSWRGSVKD
YELNHEGKCEFMIVPCPSCKERIRFNDQERHSERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKYCSKFRMPCRFHVVGCDMSVEKEKTHDHERAFA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLVELQQSLRELEARVSQLSTTSSSSCGP
PVQGAGASSSSGSGPPAPLPPPPALAPALSVSTSFTPLPSSVGAALELQLHSEKTKVAEL
GRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLERTV
GLKDLTVAEMEGRLREISATTFDGVFVWRISDFAKKRQDAVAGRAPAMFSPAFYTSKYGY
KMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIIDAFR
PDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccaggagccttcgccgccgtcgtccatggagagcaacaagccgggcctcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaagtcctgccacaacatc
ctgcggcgacccttccaggcgcagtgcggccaccgcttctgctcgtactgcttcaacctg
gccatcagcaacgggccgcagaaatgcaacgcctgcatcaaggaggacattttcgaagag
gccacgtcaatcctgaaacaaggatgcgcttttcccgacaacgccgtccggcgggaagtg
gaaaacctcacggccgtctgcgtgaacgaaagctgctcttggaggggatccgtcaaagat
tacgagctgaaccacgagggcaagtgcgagttcatgatcgtcccgtgcccgtcctgcaag
gagcgcatccgcttcaacgaccaggagcgccacagcgagcgcgagtgcccggagaggacg
ctcaactgcaagtactgcaaggaaccttttcacttcaagaacatcaaggctcacgacgag
atctgccctaaatacccgatgatctgcgaaggctgcgccaaaaagaagataccgagggag
aagtacgtggaccacatcaagtactgcagcaaattcaggatgccgtgtcgctttcacgtc
gtgggctgcgacatgtcggtggagaaggagaagacccacgaccacgagcgagcgttcgct
tacgagcacctcaacctgctgctgcactacatcatgggcatgaaggtgagcatggagggg
ctgcagccgcagggtctggaggtggcggggcacaaactggtggagctgcagcagtccctc
agggaactggaggcccgggtctcccagctcagcaccacctcctcctcctcctgcgggcct
cccgtgcagggagccggcgcctcctcgtcctccggctctggcccgccggctcccctgccc
ccgcctcccgctctggcccccgccctgtccgtgtccacctccttcacgcccctgcccagc
tcggtgggcgcggccctggaactgcagctccacagcgagaagaccaaggtggccgagctg
ggccgccgctgcaccgagctggaggtgaaggcgggcaccttcgagaacgtggtgtgcgtc
ctgaacagagaggtggagcgcttcgccaccaccatggaggccagcaaccgccagcacaag
ctggaccaggacaagatcgaggctctgagtaacaaggtgcggcagctggaaaggacggtg
ggcctgaaggacctgacggtagcggagatggagggtcggctaagggaaatatccgccacc
acgttcgacggcgtctttgtgtggaggatctcggattttgccaaaaagaggcaggacgcc
gttgccggtcgggcccctgccatgttctcgccagctttctacaccagcaaatatggctac
aaaatgtgtctgcggatctatctgaacggggacgggacggggcgcggcagccacttgtcc
ctgttctttgtggtgatgcggggactcagcgacgcgctgctcaagtggcccttcaaccag
aaggtgaccctgatgctgctggaccagagcaaccgggagcacatcatagacgccttccgg
cccgacgtcacctcgtcgtccttccagcggcccgtgagcgaaatgaacatcgccagcggc
tgcccgctcttctgcccgctctccaaactggacgccaaaaactcttacatccgcgacgac
accatcttcatcaaggccatcgtggacctcaccgggctctag
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