Syngnathoides biaculeatus (alligator pipefish): 133494480
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Entry
133494480 CDS
T09681
Name
(RefSeq) SLA class II histocompatibility antigen, DQ haplotype C beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
sbia04514
Cell adhesion molecules
sbia04672
Intestinal immune network for IgA production
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133494480
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133494480
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
133494480
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133494480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133494480
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133494480
Exosomal proteins of epithelial cells
133494480
Exosomal proteins of breast milk
133494480
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
C2-set_3
Motif
Other DBs
NCBI-GeneID:
133494480
NCBI-ProteinID:
XP_061664356
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All DBs
Position
21:3103717..3106929
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AA seq
257 aa
AA seq
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MASFARVVCLLFLTFYTADGFPFHTDNSCVFNSTDLNDIEYILSYVYNKLELLRFTSTLG
KFVGYTKFGIKQADYFNNNEDVLAALKARKEAVCKHNIEIHYETALNKSVKPRVRVQQAS
PPANGRHSAALACIVYDFYPKCVRVTWLRDGEKATSGVTSTEEMPDGDWYYQVHSHLVYT
PKSGEKITCMVEHVSLEEPLRADWDPSLPEAERNKLVIGASGLTLGLVLSLGGFLYYRKK
SFLGAGRTLVATDSGAH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttttgcccgggtcgtctgcctcctcttcctcaccttctacacggcagatggc
ttcccgtttcatacggataactcgtgtgtgttcaactcgactgacctgaatgacatcgag
tacatcttgtcatacgtctacaacaaactggagcttctgcgcttcaccagcactttgggg
aagttcgtcggctacacaaagtttggaatcaagcaggccgactacttcaacaacaacgag
gacgtgttggccgccctgaaagcccgaaaggaagccgtttgcaaacacaacattgagatc
cactatgaaactgcactgaacaagtcagtcaagcctcgcgtcagagttcagcaggcgtcg
ccccccgccaacggccgccactccgcagcgctggcgtgcatcgtgtacgacttctacccc
aagtgcgtccgcgtcacctggctgagggacggagagaaagccacgtccggggtgacgtcc
accgaggagatgcccgacggcgactggtactaccaggtccactctcacctggtctacacg
cccaagtccggagagaagatcacgtgcatggtggaacacgtcagcctggaggaacccctg
cgcgctgactgggatccatccctccccgaggccgagaggaacaagttggtgatcggggca
tccggactgaccttggggttggtcctgtccctgggaggtttcctgtactaccgcaagaag
tcttttttaggtgccggtcgtactctggttgccacagattctggtgcccactga
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