Syngnathoides biaculeatus (alligator pipefish): 133495174
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Entry
133495174 CDS
T09681
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03440
Homologous recombination
sbia03460
Fanconi anemia pathway
sbia04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133495174
09124 Replication and repair
03440 Homologous recombination
133495174
03460 Fanconi anemia pathway
133495174
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133495174
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133495174
03036 Chromosome and associated proteins [BR:
sbia03036
]
133495174
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133495174
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133495174
Protein phosphatases and associated proteins [BR:
sbia01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133495174
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133495174
Multi subunit type E3
BRCC complex
133495174
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133495174
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
133495174
BRCA1-A complex
133495174
BRCA1-B complex
133495174
BRCA1-C complex
133495174
BRCA complex
133495174
FA (Fanconi anemia) pathway
Downstream FA components
133495174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_UBOX
RTT107_BRCT_5
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-Nse
zf-ANAPC11
zf-RING_10
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133495174
NCBI-ProteinID:
XP_061665476
LinkDB
All DBs
Position
22:complement(14153175..14181160)
Genome browser
AA seq
1367 aa
AA seq
DB search
MKPPNDAEVKRGISVLWETLQCPICLDLLIQPVSTKCDHQFCKFCLLKLLDNTKLSRADC
PVCKEKITKRSLHESPGFQRLVTGLQDMIQAYERDTGTNYFTGLAQEGRRSLSVSNDKGV
DGTANSAEGVEKTLPSSHSSTIAALDGFARVMGIEDSNPLTTDGGVQDGSLGGSNEISEP
IEATSRLVTPRKGRKDQVVPAVSKSQPCRQKRKKNEEPEQISENRKKESVEKVAEWLMKV
PAEESLKLEERAEVAHVTDDSDSSASTLDVKNFNKKVQSTKTLENKVFGATYKRDRRSNR
STSTKPLSHSTEKPPKKKKKMTTSLTPSDFTKSPEGNCENYLNVSATMDVSEEAGNCEIH
KKDPDKPSERDENNSKGDSLSRETLQPERKRRKRLISTLQQVDSDLRAKAQRERSAPKKA
DRRKGPSQKGKSARALNPLVLVGVQNQDRATESKLPAESVQVHIENYPSSEDQEAPVTTG
ARRSRRLQLSFQNVPQRAPKKAATRQEAKAHGKDVKDGERSDFSEVNACKINGCVYDKNI
CVIENMELSRLENLVQGVPPVETNAGTDPDPHLVPGNASPIGGAPENPAPRSSQSSLAEK
EEDRNDSEVDIDQLLRSFNTTKRKSFRLTRSMTNRRVDEAHVQSPDKSSPTTLQDPSTKQ
QSTDLANPSSLSDLIPPTDLPKRKVDVDGAAALVLLRSTVSSALSPNKVTTREAESPLVS
LFPQVVDSGLCFYERQEIAESVVESSPKEHPRDLIENPTASGNQLSPASQHLLNTDSSLT
PDGLGLRPAQSPHGTQTSIQSSIQSVSGRRTLKRTRRLQSSSESQSSPNKVLPTLAQNFH
EVPQGGCVQDGAEADGQEVKDVSAGCSDPDCIPSSQASVDLFDPPDECDVAINGTSVSVE
SSQFTSEVLLTQQKLEMKKELEGLWKLMTVVSEVLQEKEANPAVCPEVHKSIPRGPDCPD
WKAREGDEEPRRCPRDGEELAQPTVELSSPGLAGKSVADSTLTSKDRDNKTRERDSSRAE
MVLVSSGLARADQIAVKRFAKSVGARVVSRVTAEVTHIVMCTDEHLVCERTLKYFLGIAG
RKWVVSFQWIAECFKRKKLLDESLFEVRGDVVNGSDHLGPMRARTTSDDNLLMKGYEICF
QGPFTDMTTEEMEWMAQLCGAAVAKDPLLLDSKQKSKQLVIVQPGSEPCSYSSLAKQATV
VTRGWLLDSVATYTLQGYDNYLTIRNAHGGRVDQLESFGLTVLRSRVQSRPCLCGVGVFS
PCLRGHFGFLPHPKKHPTLIGHSKLPLGVIVSVAVCLDVPCDWLATRSGCTSASCPLTAG
IGSGTHRDPCGDKRQKNEWMEEYTPVSIVILPLYVLLCLLCSSVLLL
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccccccaatgacgctgaggttaaaagggggatttctgtcctgtgggagaccctg
cagtgccccatttgtctggacttgttgatccaacctgtttccaccaaatgtgaccatcag
ttttgcaagttttgtttgctgaagctgttggacaacaccaaactcagcagagctgactgc
ccagtgtgtaaagaaaagataaccaagagaagtttgcacgagagcccaggttttcagagg
ctcgtcacaggactgcaagacatgatccaggcttatgaacgtgacactggcacaaactac
ttcactggactggcccaggaaggcagacgatctctcagtgtcagcaatgacaaaggagtg
gatgggacagccaacagcgcggagggtgttgaaaagactcttcccagttctcactcatca
actatagcagccctcgatggatttgcaagggtcatgggaattgaagattccaatcctttg
acgacagacggcggcgttcaggacgggagtctcggaggctcgaatgaaatttcagaaccg
atcgaggcaacatccaggcttgtaactccaaggaaaggccgaaaggaccaagttgtgccg
gcggttagcaaaagtcaaccctgcaggcagaagcggaaaaaaaatgaggagccggagcag
atctctgagaacaggaagaaggaaagcgtggagaaggtcgccgagtggctcatgaaagtt
cctgctgaggagagccttaagttggaggaacgcgcggaggtcgcccacgtcacagacgat
tcggacagttctgcgtccacgctggatgtcaagaacttcaacaagaaggtgcaatccacc
aaaacgcttgagaataaggtgtttggggccacttacaaacgagaccggagaagcaaccga
agcaccagcactaaaccgctgtcacactccacggaaaagccacctaagaagaagaagaag
atgacgaccagcctgactccttctgactttacaaaaagccccgaaggaaactgtgaaaat
tatctcaacgtgtctgcaacgatggatgtctccgaagaagcgggaaactgtgaaattcac
aagaaggatccagacaaaccttccgaaagggatgaaaataacagcaaaggcgacagtctc
agccgcgaaacccttcagcctgaacggaagcgtagaaagcggttgattagcaccttgcag
caggtcgactctgatttgcgggccaaagcgcagagggaacgttctgctccgaaaaaagca
gacaggcggaaaggtccctctcaaaaaggaaagtccgccagagctttgaaccccctggtc
cttgttggagttcaaaaccaagaccgtgccactgagagtaagcttccagcagagtctgtg
caggttcatatcgaaaactacccgagcagcgaggaccaggaggcgcccgttacaacaggc
gcaaggagaagcaggcggcttcagctgtctttccagaacgtcccgcagcgagcgcccaag
aaagctgcaactcgccaggaagcaaaagcacacggaaaggacgtcaaagacggcgaaagg
tcagatttttcagaagtcaacgcttgcaaaattaatggatgcgtttatgacaaaaacata
tgtgtcatcgaaaacatggagctctcccgtctggagaatcttgttcagggagttcctccc
gttgaaaccaatgcaggtacggatcctgacccacatcttgtcccaggtaatgcgagtccg
atcgggggggctccggaaaatccagcacctcgttcgagtcagagttccttggcagaaaag
gaggaggaccgtaacgacagcgaggtggacattgaccagctcctcaggagcttcaacacc
acaaaaaggaagtcgttccgcctcacccgttcaatgacaaatcggcgcgtggatgaagca
cacgtgcagagtccggacaagagcagcccgactacactacaagacccgtccaccaaacag
cagtcgacagacctcgccaacccgtcatctttgagcgatttgatccccccgaccgatttg
cccaaaaggaaagtggatgtcgatggtgcagctgctcttgttcttctccgcagtactgtc
agcagtgccctcagccccaacaaagtgacaacgcgtgaagccgaaagccctctcgtgtca
cttttccctcaggtggtggattctggtctctgtttttatgagcgccaggagattgcagaa
agtgtggttgaatcgtctccaaaggagcaccccagggacctgatcgagaaccccaccgcc
tctggaaaccagttgtcacctgcgtcccagcatctgctgaacactgacagctccttgact
ccggacggcctcggacttcggccggcccagtcgccccacggaacccagacaagcatccag
tcgtccatccagagcgtctctggccgcaggacgctaaagaggactcgcaggctgcagtcc
tcttcggagtcacagagcagccccaacaaggtgttgcccactttggcgcaaaatttccat
gaggtgcctcagggcggctgtgtccaggatggtgctgaagctgatgggcaagaagttaag
gatgtctctgcggggtgttcagatccagactgcattccctccagccaagcgtccgtcgac
ttgttcgaccctccagatgaatgtgatgtagcaattaacggcacaagcgtgtctgtggag
tcatcgcaattcacaagcgaggttctccttacgcagcaaaagctggagatgaagaaggag
ttggaaggcctgtggaagttgatgacggtggtgtccgaggtgctccaggagaaggaggcc
aaccctgctgtgtgccctgaggtgcacaaatccatcccacgtggcccggactgtccagac
tggaaagcccgtgaaggtgatgaggagcccagaaggtgtccccgtgatggagaagagtta
gctcaacccactgtagagttatcgtcaccaggactagctgggaaaagcgttgcagattca
actttaacctctaaagacagggacaacaagactcgagagagagactccagcagagctgaa
atggttctggtgtcctcaggtttggcacgtgctgatcagatcgcagtgaagaggtttgct
aagagtgtcggcgctcgtgtggtttcccgggtgacggcagaggtgactcacatagtcatg
tgcacagatgaacatcttgtatgcgagcgtaccctcaagtacttccttggcattgcgggc
aggaagtgggtggtgagtttccagtggatcgctgagtgcttcaagcgaaagaagctcttg
gacgagagcttatttgaagtgaggggcgacgtggtaaacgggtccgaccacttgggccca
atgagagctcgcaccaccagtgacgacaatcttctgatgaagggctacgaaatctgcttc
cagggacctttcacagacatgaccacagaggaaatggagtggatggcgcagctgtgtggg
gccgcggtggccaaagacccgctgctgctcgacagcaaacagaagtccaagcagctcgtg
atcgttcagcctggatcagaaccatgctcgtacagcagtcttgccaaacaggctacagtt
gtgactcgcggttggttgttggactcggtggccacctacacactccaaggctacgacaac
tacctcacgattaggaatgcacacggtggacgggtggatcagctggaaagctttggcctc
acagttctgaggtcccgggttcaatcccggccctgcctgtgtggagttggcgtgttctcc
ccgtgcctgcgtgggcacttcggtttcctcccacatcccaaaaaacatccaacattgatt
ggacactctaaattgcccctcggtgtgattgtgagtgtggctgtttgtctcgatgtgccc
tgcgattggctggcaacccgttcagggtgtacctccgcctcctgcccgttgacagctggg
ataggctctggcacgcaccgcgacccttgcggggataagcggcaaaaaaatgaatggatg
gaagaatacacgcctgtgagtatcgttatattgcctctctacgtgttgctgtgccttttg
tgttcctcggtactactactttag
DBGET
integrated database retrieval system
