Syngnathoides biaculeatus (alligator pipefish): 133495590
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Entry
133495590 CDS
T09681
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133495590
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133495590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
133495590
NCBI-ProteinID:
XP_061666415
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All DBs
Position
22:13537787..13554920
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AA seq
1253 aa
AA seq
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MRDTGEATDGGHKNSKSEKDQSWIPKIFKKRICTTFVEDSLSNGALCQCGGTRDSHASVA
LGDYFSTAIVNHWDSGQHSSEYPTDAFGELQFAGASKRHSYFLRLSWDTSPSMVYTLMTA
HWGLAAPNLVVSVVGGEGRTKVKTWVREVLRQGLVKASQSTGAWILTAGLREGVGRCVGE
AVRDHATAASSVSLNKVVALGVAPWGLVHNRQQLVNEQGSFPAKYYVHNTTRDSCCLDNN
YQAFLLVDDGSMGRRGGETVFRAKLEDYISHQRTGIWGSGSIDIPVLCMLISGDASLLER
VDLSLKNSMPWLVLAGSGGTADFLSEIVKNLSSAPVVQSSGEGDGEAGPSVDLKDRVAER
VRKYFPSEAETDKHVERALSIYQNKDLITIYHGEQEGPNDFDTVLLKALVGASKQRVSVE
HSPYNEELKLAVTWNRVDIAKSELFNGDIQWRYEDLEDSMTDALINDKPQFVRLFTENGL
NILDYLTYGRLESLYRSVADGTLLYQLLQRRLLERLGTPSHLQDTTSKGAAENIHSGPVS
ELSLFEVSRVLELLMGDVCQPFYYAPLDLEQITSKRRAMRRASKLLRGDCLYREKRCLFP
WASLFIWAVLQNRSEMAIFFWEMAGESVLSALSGCKMLRELSKLEAETETKLSMKELAQK
FENLAHDIFGSCYRSNESRSFTLLIRKSPVWGGTTCLQMGMGADARLFFSHDGVQSLLSQ
IWWGDMKRNTEVWKLILTFFCPILCYTNLISFRTPDDQQQEKDVKPSDDGIGREDSLYGT
TVFSFSDIKHIEADSQGVYTPRTATIRGIRRPPKPPERPFIVSRWRQFWFAPVTSFLGNV
LMYFLFLLLFAYVLLVDFKMPPPAGPAITELVLYFWVFTMVCEEIRETFFLGTMTLRQRL
RVYIQDVWNKCDLTAIILFIIGLICRMFNWSYELGRDVLCVDYMVFTLRLIHIFAIHKQL
GPKIIIVGKMMKDVFFFLFFLGVWLMAYGVANQALLYSYDPQLDRIFRRVFYRPYLHIFG
QIPVEEMDVGKDWDMPCTGNVTLIDGGAEPCRITYSNWLVVILLVIYLLVTNILLINLLI
AMFSYTFNEVQANSDIYWKFQRYNLIVQYHSRPSLAPPFIILSHINLFIKRNIRKVSSVK
IHHFVLQLKGKAANRLMTWETIQKEDFLTAQNKIQKSSDSERLKRMSAKVDGVMKHLTES
RDFDHRLRTLENEMEYCSSALSWIVDTLAQGSSFKPPRPPPSLRDSFTPSSGS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgagagacactggagaagcgacagacggcggacacaaaaacagcaaatcggagaaagac
cagagctggattcccaaaatcttcaagaaaagaatttgcaccacctttgtggaagattct
ttaagtaatggtgcgttgtgccagtgtggggggacacgagactcccatgcctctgtggcc
ctcggcgactatttcagcactgccattgtcaatcactgggacagcggccagcactcctct
gagtacccgacggatgcctttggggagttgcagtttgcaggcgccagcaagaggcacagc
tacttcttgcggctgtcatgggacacatcgccgtcgatggtctacaccctgatgacggcc
cactgggggctggctgctcccaaccttgtggtgtccgtagtcggcggcgaaggcaggacg
aaagtgaagacgtgggtgcgggaggtcctccggcagggcctggtaaaagcctcgcaaagc
acaggagcttggatcttgacagcgggattgcgggaaggcgtcggcaggtgcgtcggcgag
gcggtgagggatcacgccaccgcagcctcctccgtctccctcaacaaggtggtggctctg
ggtgtggctccctgggggctcgtccacaaccggcagcagctggtcaatgaacagggcagt
tttcctgccaagtattatgtccacaacacaacccgggactcgtgctgcctggataacaac
taccaggctttcctgctggtggatgacggcagcatgggacgcagaggaggcgagaccgtc
tttcgggcgaaactggaggactacatctcccaccagcgcacgggcatttggggcagtgga
agtattgacatcccagtcctttgtatgctgatctcaggggatgccagtctgctggagaga
gttgatctctctctgaagaactccatgccctggttggtgctggccggctcaggaggcacg
gccgacttcctgagcgagatcgtgaagaacttgtcgtccgcgccggttgtccagtcttcc
ggcgagggcgacggtgaggcaggtcccagcgtggacttgaaagacagagtggcagaacgg
gttcgcaaatactttccctctgaagcggagacagacaaacatgttgagcgtgctctgagc
atataccaaaacaaagacttgatcaccatctaccacggagagcaggagggccccaacgac
tttgacacggtgctgctaaaagctctggttggagcatcgaagcagcgcgtgtcagtcgaa
cacagtccgtacaatgaagaactgaagctcgcggtcacgtggaacagggtcgacatcgcc
aaaagcgaacttttcaacggagacatccagtggaggtatgaagacctggaggactcgatg
accgacgccctgatcaacgacaagcctcagtttgtgcgcctcttcaccgagaatggccta
aacatcttggactacctgacctacggccggctggaaagtctctacagatcagtggccgac
gggacacttctttaccagctgctccagcgccgcctgctggagagactcggtacaccgtca
cacctgcaggacacgaccagcaaaggtgcagctgagaatatccacagtggaccagtgtcc
gagctcagcctttttgaggtgtcaagagtgctagagctgttaatgggtgatgtctgccag
ccgttctattatgcccccttggatttggaacagatcacgtccaagaggagagcgatgagg
cgtgccagtaagctgctgcgtggcgactgtttgtatcgtgagaagcgctgcctcttcccc
tgggcgtctctcttcatctgggccgtcctccagaaccgcagcgagatggccattttcttc
tgggagatggcaggcgaatcggtgctgagcgctctgagtggctgtaaaatgctcagggag
ctttctaaactggaagctgagaccgaaaccaaactctccatgaaagagttggcccagaaa
tttgagaacctggcacacgatatcttcggttcttgttaccgcagcaacgagagtcgctcc
ttcacgctgctgatccgcaaatctccggtctggggcgggaccacctgcctccagatggga
atgggtgcggacgcccgccttttcttcagccatgatggagtgcagtctttgctgtcccag
atctggtggggggacatgaagaggaacaccgaagtgtggaaactcatactcaccttcttc
tgccctatcctctgctacacaaacttgatctctttcaggacaccagatgaccaacagcag
gagaaggacgtgaagcccagcgacgacggcattggccgggaagacagcctctacggcacc
accgtcttctccttctccgacattaagcacattgaagcagactcacaaggcgtatacact
cccaggacggctaccatcagaggcatacggcgcccgcctaaaccacccgagcggcccttc
atcgtgtcgcgttggcgtcagttctggttcgcgcccgtcacctcctttttgggcaacgtc
ctgatgtacttcctctttttgctgctttttgcctacgtgctgctggtggatttcaagatg
ccgccccccgccggtccggccatcaccgagctggtgctttatttctgggtgttcaccatg
gtgtgcgaggagatacgagagaccttttttttagggacaatgactttacgccagaggctc
agagtgtacattcaggacgtgtggaacaaatgtgacctcactgccattattttgttcatc
atcggactaatttgcaggatgttcaactggtcgtatgaactcggccgggatgtcctgtgt
gtggactacatggtcttcacactccgcctcattcacatcttcgccattcacaaacagctc
gggcccaaaatcatcatcgtgggaaagatgatgaaggatgtcttcttcttcctcttcttc
ctgggggtctggcttatggcctacggcgtggccaaccaagctttgctgtattcctacgac
ccccaactggaccgcatcttccgtcgggttttctacaggccgtacttgcacattttcgga
cagatccccgtcgaagaaatggatgtggggaaagactgggacatgccgtgcaccggcaac
gtaacgctgattgacggcggtgcagagccgtgtcgaattacgtacagcaactggctggtg
gtaatcctgctggttatttatctgctggtcaccaacatccttctcatcaatcttctcatc
gccatgttcagttacacctttaatgaggtgcaggccaacagcgacatttactggaagttc
cagcggtacaacctgatcgttcagtatcactcgcggccctccctggcgccgcccttcatc
atcctttctcacatcaacctcttcatcaagaggaacatccgcaaggtgtcctccgtcaag
atccaccacttcgtgttgcagctcaaaggcaaggcagcaaacaggctgatgacgtgggaa
accatccagaaggaggacttcctgaccgcccaaaacaagatccagaagagcagcgactcg
gagaggctgaagcgcatgtctgccaaagtggacggtgtgatgaagcatctgaccgagagc
agggactttgaccacaggcttaggactttggagaatgagatggagtattgctccagcgcc
ctgagctggattgtcgatactttggcgcaaggcagctcgtttaaacctccgaggcctccc
ccatcgctgagagattcgttcactccttcttctggttcttga
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