Syngnathoides biaculeatus (alligator pipefish): 133496725
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Entry
133496725 CDS
T09681
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
sbia04146
Peroxisome
sbia04977
Vitamin digestion and absorption
sbia04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133496725 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133496725 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
133496725 (abcd4)
04980 Cobalamin transport and metabolism
133496725 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133496725 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133496725 (abcd4)
Enzymes [BR:
sbia01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
133496725 (abcd4)
Membrane trafficking [BR:
sbia04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
133496725 (abcd4)
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
133496725 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
DEAD
AAA_7
AAA_5
NACHT
FtsK_SpoIIIE
AAA_29
Sigma54_activat
T2SSE
AAA_19
RsgA_GTPase
nSTAND1
ATP-synt_ab
AAA_15
bpMoxR
Motif
Other DBs
NCBI-GeneID:
133496725
NCBI-ProteinID:
XP_061668606
LinkDB
All DBs
Position
23:6353080..6361392
Genome browser
AA seq
509 aa
AA seq
DB search
MYVDWRKTLTESLHTAYFQGRVYYTLNVLREDLDNPDQRISQDAERLCKQMSSMASRIIV
SPFTLAYYTYHCFYSTGWLGPLSIFAYFVVGTGANKVLMGPIVSTLFEQEKLEGDFRFKH
MQIRVNAESAAFYRAGKVEHARTDGRLQTLLQTQQSLINKGLWLYIGVNTFDYLGSFLSY
VIIAIPIFAGLYAGLTPGELSALISRNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGE
LSEVMDDVLRQQCDYDPASGESYDFDSDSTVHGGPLDTAFVVDRLSYKCPSSERQLVEDL
SLTISEGTNLLVVGNTGTGKTSLLRVLNRLWEAESGFVQMTTCFGPRGTLFLPQKPYLTD
GTLREQVIYPLKDVYPESGSVDDDRIMKFLELAGVSGLVRRTGGLDQVVDWNWYDVLSPG
EMQRLCFARLFYLQPKYAVLDEATSALTEEAESQLYRTCKQLGMTVLTVGHRRSLEKHHD
MQLKLCGDGRWELSRIKGRGGSGRDDAVM
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtggactggaggaagacgctaacggagagtctgcacacggcctacttccaggga
cgagtctactacaccctcaacgtgctccgagaggacctggacaaccccgatcagcgcatc
agtcaggacgccgagaggctgtgcaagcagatgagctccatggcgagtcggatcatcgtg
tcgcccttcacgctggcttactacacctaccactgcttctacagcacaggctggttgggc
ccgctgagcatcttcgcttactttgtggtggggacgggggccaacaaagtcctgatgggg
cccatcgtgtccacgctcttcgagcaagagaaactggagggcgacttcagattcaagcac
atgcagatccgagtcaacgccgagtcggcggctttttacagggccggcaaagtggagcac
gcgaggactgacgggcggctgcagactttgctgcaaactcagcaaagtctgatcaacaaa
ggcttgtggctctacattggcgtcaacaccttcgactacctgggcagcttcctcagctac
gtcatcatcgctattcccattttcgccggcctctacgccggcctgacgcccggcgagctc
agcgcgctcatcagcaggaacgccttcgtgtgcatctacctgatcaatggcttcacgcag
ctgatcgacctttccaccacgctgtcggacgtggccggctacacccacaggatcggcgag
ctgagtgaagtgatggacgacgtcctgcgccagcagtgcgactacgacccggcttcgggg
gaaagctacgactttgacagcgactccaccgtgcacggcggccccctggacacggccttc
gtggtggaccggctgtcctacaagtgtccctcctcggagcggcagctggtggaggacttg
agcctgaccataagcgagggcaccaacctgctggtggtgggcaacacgggcacgggcaag
acgtcgctcttgagggtcctcaacagactgtgggaggcggagagcggttttgtccaaatg
acaacgtgcttcgggccccgagggaccctcttcctgccccaaaaaccgtacctgacggac
ggcacgctgcgcgaacaggtcatctacccgctcaaggacgtttacccggaatcagggtcc
gtagatgacgaccggattatgaagtttctggagctggcgggtgtgtcgggtctggtgagg
cggaccggcgggctggatcaagtggtggactggaactggtacgacgttctgtctccgggc
gagatgcagcgtctttgtttcgcccgactcttctacctgcagcccaaatacgcagtgttg
gacgaggccaccagcgccctgacggaggaggcggagtcgcagttgtatcgcacgtgcaag
cagttggggatgaccgtgctcaccgtggggcaccgcaggagcttggaaaagcaccacgac
atgcagctgaaactgtgcggcgacggccgttgggagttgagccgaatcaaaggccgcggc
gggagcggcagagacgacgccgtcatgtga
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