Syngnathoides biaculeatus (alligator pipefish): 133496820
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Entry
133496820 CDS
T09681
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133496820
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
133496820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
HEAT_2
Atx10homo_assoc
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
133496820
NCBI-ProteinID:
XP_061668827
LinkDB
All DBs
Position
2:2561497..2575124
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AA seq
698 aa
AA seq
DB search
MMLAEPLRSAVRLGSVDETSLAVPSDARLHTGAHRVLDQVQTIKRSKSKHGKNGAATSPT
LPALSPLDEFGTFQFLPSKANGTFGRNVSKMATYNKAQYAQKSRSLSTKSLGARHHSSSS
AWDQQINPSNWPQNPTGMKPSRSDPALAPASIRRVKGHTSQSHVKRLSTHSTSNGFHTAA
GQQRFLEAPPDHSQTIKTSKIEQQSGVNNSLNVSDLTIKEAVEFLSRPEEKFQQCGATII
QQTTFKDDRAKHEVLQLGGIPTLVSLLRSPSPAVSQAAAGALRNLVFKNHKNKLQVQQCG
GIAKALQLLKETECSETQKQITGLLWNLSSADELKGELIATALPALTENVVVPFTRWSDD
SATNNIHPEVFYNTTGCLRNLSCAHLRERTAMRDCRGLIDSLMCYLQSCVADDNPDDKSV
ENCACILHNLTYQLEAESPKCFADFIPLTESQSGRKSPTVGCFSPKSGKVQKQFSFDAVR
GMLDEGDPKGAKWLCHPKAMQTYLSLLSSSQKDATLEACCGALQNLTASKELGSSAMSQI
LVQKLGGLLHITPLLRSPKQSLQKAAISLLGNIGRTSSLQASMAKQVLPELTGLLSAGPR
ELGNSDESVATACNTVRNLIMADTEANKKFIDSDLVSSLAGLSGNGGFPKSSKAASVLLY
HLWNDKNMQSILKKLGMSKSLFINDSTTAAYRSVQIID
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttgccgagccgctgcgttcggccgtgaggttgggcagcgtggatgagacctcc
ctggctgtgccgtccgacgcccggctgcacacgggagcgcaccgggtgctggatcaagtg
cagaccatcaagaggagcaagtccaaacacggcaagaacggcgctgctacaagccctact
ttgccagccttgtcacctctggacgagtttggaacgttccagtttttgccgagcaaagcc
aacggcaccttcggccgcaatgtctccaagatggcgacgtacaataaagcgcagtatgcc
caaaagagtcggtctctgtccaccaaaagcctgggagccagacaccacagctcctccagt
gcatgggatcaacaaatcaacccttccaactggcctcaaaatcccactgggatgaaaccc
agccgcagcgatcccgctttggctccagcaagcatcaggagagttaaagggcacacgagc
cagagtcacgtgaagagactcagcacacactcaacgagcaatggcttccacacagctgcg
ggccagcagcgatttttggaagcgcctcccgaccactctcagaccatcaaaacgtccaag
attgaacaacaatcgggcgtcaataattccctgaatgtctcagacttgaccatcaaggaa
gctgtagagttcttgtctcggcctgaggagaagttccagcagtgtggtgctaccatcatt
cagcaaaccacttttaaagacgatcgtgccaaacacgaggttctccagctcggggggatc
cccactcttgtgtccctgctgcgcagtccgagtcctgccgtgagccaggccgctgccggg
gccttgagaaacctagtcttcaagaaccacaaaaataagctacaggtccagcagtgcggc
ggcatagcgaaagcgctgcagttactgaaggagacagaatgtagcgagacccagaaacag
atcacaggcctgctgtggaacttgtcatctgccgacgagctcaaaggagaactcatagcc
acggccctgcccgccctgacggagaacgtggtagtgccgttcacccgctggtcggacgac
agcgccaccaacaacatccaccctgaggtcttctacaacaccacgggctgcctgcgcaac
ctgagctgtgctcacctgagggagcggacggcaatgcgagactgccgtggacttatcgac
tccctgatgtgctaccttcagtcctgcgttgctgacgacaaccccgatgacaagtctgtg
gagaactgtgcctgcatcctccataatttgacctaccagctggaggccgagtcacccaag
tgctttgctgacttcatccctttaacggagagccaatcgggcaggaaaagccccacagtt
ggctgcttcagccccaagagtggcaaggttcaaaagcagttttcatttgacgctgttcga
ggcatgttggacgaaggtgacccaaaaggtgccaagtggttgtgccaccccaaagccatg
cagacctacttatctctgctgagctcgtcccagaaagatgccaccttggaggcgtgctgt
ggcgcactgcagaacctaactgctagcaaggaactggggtccagcgccatgagccagatt
ctggtccagaagttggggggtctgctgcacattaccccgctgttgaggtcacctaagcaa
agcctgcagaaagccgccatttccctactaggcaacatcggccgaaccagcagcctgcaa
gcctccatggcaaagcaggttttgccggaactcaccggcctcctctctgctggccccaga
gaactgggcaactctgatgaaagcgtagccacggcttgcaacacagtgcggaatctgatt
atggcggacacggaggccaacaagaagtttatcgacagcgatttggtttcatcactggct
ggactcagcgggaatggcggttttcccaaaagcagcaaagcggcgtctgtgctcctctac
catttatggaacgacaagaacatgcaaagcattttgaaaaagttaggaatgagcaagtca
ttattcatcaacgacagcaccacggcagcatacaggtctgtgcagattatcgactga
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