Syngnathoides biaculeatus (alligator pipefish): 133499037
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Entry
133499037 CDS
T09681
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04137
Mitophagy - animal
sbia04141
Protein processing in endoplasmic reticulum
sbia04210
Apoptosis
sbia04217
Necroptosis
sbia04621
NOD-like receptor signaling pathway
sbia04622
RIG-I-like receptor signaling pathway
sbia04920
Adipocytokine signaling pathway
sbia05132
Salmonella infection
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133499037
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133499037
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133499037
09143 Cell growth and death
04210 Apoptosis
133499037
04217 Necroptosis
133499037
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133499037
04622 RIG-I-like receptor signaling pathway
133499037
09152 Endocrine system
04920 Adipocytokine signaling pathway
133499037
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133499037
09171 Infectious disease: bacterial
05132 Salmonella infection
133499037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133499037
04121 Ubiquitin system [BR:
sbia04121
]
133499037
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133499037
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133499037
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
133499037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_4
Sina_ZnF
zf-RING_6
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
133499037
NCBI-ProteinID:
XP_061672497
LinkDB
All DBs
Position
4:16922553..16986926
Genome browser
AA seq
608 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKTILANNLEDKHLCNSCLKILRRPLQAQCGHRFCSYCFNK
IVSSGPEKCNACIKEDLFEEPTSILKQGGAFPDNAARREVEALEAICPNEGCTWTGSIKD
FEATHEVHCDFTIILCPSCKELMRANEQERHDERECPERTLNCKYCKEAFLLKNIKTSQL
RFSAKSESRASPRFVPPMHHVDAASVCPCRCTRWRAHDEICPKYPMICEGCAKKKIPREK
YVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHEHQCSYEHLNLLLHFIMGIKVSLESL
QPQTLEVASHKVAELHQSLRDLELKMSQLGRGGAAASVQGACVPTLNSSFTPLPSAVGAA
LELQLQNEKTKVVELSRRCQELELKVSTFENIICVLNREMERSCTTMEAYNRQHRLDQDK
IEILNNKVRQLERTVSLRDLSIVEMEGKMREMSAAAYDGIFVWKISDFTKKRQDAVAGRA
PAMFSPAFYTSKYGYKMCLRIYLNGDGTGRATHLSLFFVVMRGHSDALLKWPFNQKVTLM
LLDQNSREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLDSKNSYIRDDTIFLK
AIVDLTGL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggagccgtctccaccatcttccctggaaggaaacaaaccaggcttccca
aagacaattttggccaacaacctggaggacaaacatttatgtaattcttgtctgaaaatt
ctacgaaggcccttacaggcgcaatgtggccaccgcttttgttcgtactgtttcaacaaa
atagtgagctctggacccgagaaatgcaacgcttgcatcaaagaagacttgtttgaggaa
cccacctcgattctcaaacaaggaggcgcttttccagacaatgcagctcggagagaagtg
gaggccttggaagccatttgccccaatgaaggatgtacatggacagggagtattaaagat
tttgaggctacccatgaggtccactgtgattttaccatcatcttgtgcccttcctgcaaa
gagttgatgagagctaatgaacaggaacgccacgatgagcgagaatgtccagagaggaca
ctcaactgcaaatactgtaaagaagcattccttttaaagaacatcaagacatcgcagctg
cgcttcagcgctaaaagtgagtctcgtgcaagcccaagatttgtgccaccaatgcaccat
gtcgatgcagcaagtgtgtgcccttgtagatgcacgagatggagggcccatgatgaaatt
tgcccgaagtatccaatgatctgtgaaggttgtgcaaagaaaaagatacccagagaaaag
tatgtggaccatattaagttctgcagtaaatttaaagcaccatgcagatttcatgttgtt
ggctgcgatacgtctgtggaaaaggagaagatccatgaccatgagcatcagtgttcttat
gaacacctcaacctgcttctgcattttataatgggcatcaaggtgagtctggagagcctg
cagcctcagacgctggaggtggccagccacaaggtggctgagctccaccagtccctcaga
gacttagaactcaagatgagtcagcttggtagaggtggtgctgcagcttctgtgcagggt
gcatgtgtaccgaccctcaactcctccttcacaccactacccagtgctgtgggtgctgcc
ttggagctgcagctccaaaatgaaaagaccaaggtagtcgagctaagcagacggtgccaa
gagctggagcttaaagtgagtaccttcgagaacattatttgcgtcctcaaccgagagatg
gagcgctcctgcacaaccatggaagcctacaaccggcaacatagactggaccaggacaaa
attgagatcctcaataacaaggttcgacagctggagagaacagtgagtctgcgggacttg
tccatcgttgagatggagggcaagatgagggagatgtcagcagccgcttatgatgggatt
tttgtgtggaagatctcagattttacaaagaagaggcaggatgctgttgctggccgagcc
cctgctatgttctctcctgccttttatacgagtaaatatggctacaaaatgtgcttgcga
atctacctaaatggagatgggacaggaagggccacccacttatctctgttctttgtggtg
atgaggggacacagcgacgccctacttaagtggccttttaatcagaaggtcaccctaatg
ctgctggaccagaacagcagggagcacatcattgatgctttccggcccgacatctcgtcc
tcttccttccagaggcccgtcagtgatatgaacattgccagtggctgtccgctcttctgt
ccactctccaagttggactctaaaaactcttacattcgggatgacaccatcttcctcaag
gccattgtagacctcactgggctctag
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