Syngnathoides biaculeatus (alligator pipefish): 133500692
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Entry
133500692 CDS
T09681
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133500692 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133500692 (phc1)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
133500692 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
133500692
NCBI-ProteinID:
XP_061675705
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All DBs
Position
5:complement(32491827..32503449)
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AA seq
762 aa
AA seq
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MDASEDQNTSTSTNNTTTTTNGNPQTSRTSRPPQIAHMSLYERQAVQALQALQRQPNAAQ
YFQQLMLQQQISNAQLHNLAAVQQATLAASRQSNTPSSSISQATTTVNLSTTSAGGTAVT
PRPHGPVTSATTTTLSQSVLLGGNPPGQGQMYLRVNRSLRAPLASQLIFMPGGTATATVA
TVAQTQQQQTEAPTSASAQSDNDQVQNLALHCASTPRGVAIKSELPERKDPGNFPVSQQQ
QVQPQSQPAKSPGNSMAIKGSNQPAMSVPPPGSSVASSASSSPALPLSQLLLSPSAAPVI
LVPTSNVPTSSQGYSIGSVAPKANVNTQTLVVQPLQQANAAADKGPVPIQPKTAQGHRLP
VQVSPRQPLPILPAPPSNNQAAHNPPHIPVQLVGARQCIGGSVQAVALAQVRNVTTQENV
NANAASHNTSTTLNKSANGSLKRKSDCDAPNETTAGSSETVSMKDAAPALTPASTKEPAP
LPPASSLPPNPSLPLPLSRVGHGDKERAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVAG
LLKDRDFALGARVENGPPMLKCEYCLSLAPASQFKGTKRFCTNTCAKRYNVSCSQHYKSS
RGIAITPAKSAPRRRGPPRRNKSSSNKLSTRHRNVKRRSDSSHSEEASSDGDEEEVEDIP
SLSPSSSHSHNNAPQSDASAPGSLPMETAGFLSATPAQWSVDEVCRFISSLQGCEELAAH
FLSQEIDGQALLLLREDHLISTMNIKLGPALKICASINSLRE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagtgaggaccaaaacaccagcaccagcacaaacaacaccaccacgaccacc
aatggaaaccctcaaaccagcagaacctcccgcccaccgcagattgcccacatgtctcta
tatgagcgacaggccgtgcaggcacttcaagccttgcagcgacagccaaatgcggcgcag
tacttccagcaactcatgcttcagcaacagatcagcaatgctcaacttcacaacctagca
gctgtgcaacaggctacacttgcagcaagtcgccaatctaacaccccgagtagcagcatc
tcacaggccaccaccactgtgaacctcagtaccacttcggcagggggaactgcagtgacg
cctcgtccccacgggccagtcacctccgcgacaacgaccaccctcagccagtcagtgttg
ttgggggggaaccctccaggacaggggcagatgtatcttagggtgaaccgttctctcagg
gctccgctggcctctcagctcatcttcatgccaggcggcacagcaacagctactgtcgcc
acagtggcccagacccagcagcaacagactgaagcccctacttcagccagcgctcagtcc
gataacgatcaggtgcagaatttggccttacactgtgcatccactccaagaggggtcgcc
atcaagtccgagctccccgagaggaaagaccctggcaactttcctgtcagtcagcagcag
caagttcaacctcagtcgcaaccggccaaatcgccgggcaactcgatggccatcaaaggc
tccaaccagcccgcaatgagcgtccctcctcccggttcctcggtggcctcctccgcttcc
tcgtctccggcgctcccactttcccagctgctcctttcgccctcagctgcccccgtcatc
ctggtgcccacctccaacgtgcctacctcctctcagggctactccattggctcggtcgcc
cctaaagccaacgtcaacacgcagaccctggtggtgcaacccctccagcaggccaacgcc
gccgccgataaaggacctgtgcccatccagcccaagacggcgcagggacaccgtttacct
gtgcaggtgtctccgcggcagccacttcctattctcccagccccacccagcaataaccag
gcggcccacaatcccccacatatccctgtgcagctggttggggcaaggcagtgcataggg
ggaagcgtgcaggccgtggccctggcgcaggtgcgaaacgtcaccacccaagaaaatgtt
aacgctaacgctgcctcacacaatacttctacaactttgaataagtctgccaatgggtcc
ctgaagaggaagtctgactgcgatgcacccaacgaaacgactgcaggatcttctgaaact
gtttcgatgaaagatgctgctccggctttaactccagcatcgacgaaggagccagctcct
cttcccccagcttcctcgttgccacccaacccatccttgcctctgccactgtcgagggtg
ggccatggcgacaaagagcgggcgccgctcccccaggcggtggtcaaacctcaagtcctc
acgcacctcatcgagggcttcgtcatccaggagggagccgagccttttcccgttgctgga
ctccttaaagatcgtgactttgccctgggtgcccgtgtagagaatggcccaccgatgttg
aaatgtgagtactgcttaagcctggcaccagccagccagttcaaaggaacaaagagattc
tgcaccaacacctgcgctaagaggtacaatgtaagctgcagccaacactacaagtcaagc
agaggaatcgccatcaccccagccaagagcgcccccaggcggcgcggaccccctcgacgc
aacaaatccagtagcaacaagttgtccacgcggcatcgaaacgtcaagcgccgctcggac
tccagccactcagaggaagcgtccagtgatggcgacgaggaggaagtggaggacatccct
tccctctcccccagctcctcccactcacacaacaacgctccccagtcggacgcctcggct
cccgggagcctccccatggagacggccggcttcctgtcggcaactcccgcccaatggagc
gtagacgaagtgtgcaggttcatctcgtcgcttcaaggctgcgaggagctggccgctcac
ttcctgtcgcaggaaatcgacgggcaggctctgcttctcctccgcgaggaccatctcatc
tccaccatgaacatcaagctgggtcctgccctcaaaatctgcgcctccattaacagcctg
cgcgagtga
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