Syngnathoides biaculeatus (alligator pipefish): 133501043
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Entry
133501043 CDS
T09681
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia00310
Lysine degradation
sbia01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
133501043 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133501043 (setdb1b)
Enzymes [BR:
sbia01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
133501043 (setdb1b)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
133501043 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
133501043 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
Tudor_5
DUF5604
SET
MBD
Pre-SET
53-BP1_Tudor
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
133501043
NCBI-ProteinID:
XP_061676439
LinkDB
All DBs
Position
5:28962103..28982374
Genome browser
AA seq
1221 aa
AA seq
DB search
MTRLIAIHINSTKTLRMEVEGWDSSLGEELGVSLDELKKWIDEIVEKSEVVQKKQAQLTE
LTEWVEQKEQEEAATEKLLNDANKSLVECEKLVRETYQKNGLVYKSSSEDEDGGGGLLAS
EVIEIDDDDDDDDVIAVGCLVPPQKPCITIQETMDTSTALKKTAEQVNKLVQIVTRPSSG
TSLPRSPTQPGTYPAPPAVIVSQILANPVGHTSPKKREDELRVGMSILGKKRMKTWHKGA
LVAINAIGSNTFKYKVKFDKGKSLLSGNHVAFDYNPTLESLFVGARVVAKYKDSHQMWLY
AGIVAEMPTTKNQMRFLIFFDDGYASYVNLPDLFPVCRPMKRTWEDIEDTSCRDFIEEYI
TAYPSRPMVLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEP
MFNLKMTTANTQEKKLAGQLRTRPNMGALRSKGPVVQYTSDGHVGASPIGASPVKSVLPA
QTQQTPTTSPSSHVTQSSRPESSKHQMAKKSTSPFVPGVGGTHASKVMQSLTSSPGNMPR
INSPAVSTSPAHLQPRLVTTPATPPIMPHPVATIPHQPSYRAPADRIFYMEHICQPACLN
RVRPAKPDIHRGKNPLLIPLLYDFRRMTGRRKVNRKMTFHVIYKAPCGLCLRNMAEIQRY
LFQTTCDFIFLEMFCLDPYVLVDRNFQPLRPFYYIPDITGGNEDIPLSCVNEIDSTPPPQ
VAYSKERIPEDGVYINTSTDFLVGCDCTDGCQDKSKCSCHQLTLQATGCTPGGQINPNAG
FLNKRLEECLPTGIYECNKRCKCCSQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVA
KGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGV
DMTRLKIQPSALVTNSFGRQGKKAGSSRSSEESNDEEEKESKSDESDSSDDTFVKDTYFS
SSSVWRSYTTRGQAKGHKEGSQDSKDGNPTPSKGEEKSLPVPEEMGKSKVASWLTSQGIK
KDPGDNKSQVKPDMAKKPDVTTLSDSDDVQTISSGSDDNKEKEKATLGVVKKQVAVKSTR
GIALKTGHGMMVKTGVPGAGVSQGGLGGKSGQQGQTGMGGETGPRNTRQFFDGEESCYII
DAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVG
SVEGKVLLCCCGSTECRGRLL
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtttgattgccatacacataaactcgaccaagaccctcagaatggaggtggag
ggctgggattcaagtctgggggaagagctcggtgtctctctggacgagttgaagaaatgg
atcgacgaaattgtggagaaaagtgaggtggtgcagaagaagcaggctcagctcaccgag
ctgacagagtgggtggagcagaaggaacaagaggaggccgcaacggagaagctcctcaat
gacgccaacaagtcgctggtggagtgtgagaagctggtgagggagacctaccagaagaat
ggcctggtgtacaaaagcagctcagaggacgaagacggcggtgggggcctgctggcctcg
gaggttattgagatagatgatgatgacgacgatgacgacgtcattgctgtcggctgcctg
gtcccgccacagaaaccctgcattacaatccaagagacaatggatacgtccactgcactt
aagaaaactgctgaacaggtcaacaaattagtccaaatagtcaccaggccttcttcaggg
acttcattacccagatcgccaactcagccaggtacctaccctgcaccgccagccgttatt
gtatctcagattcttgccaatcctgtgggccacactagccccaaaaagagagaagatgag
ctccgagtgggcatgagcattctgggaaagaaacgcatgaagacctggcataaaggcgcc
cttgttgccatcaacgccatcggctcaaatacatttaaatacaaagtgaagtttgataaa
ggcaagagtctgctctctgggaaccatgtggctttcgattacaaccccaccctagagagt
ctgtttgtgggggcccgtgtagtggccaagtacaaggacagccaccaaatgtggctctat
gctggcatcgtagcagagatgcccaccaccaaaaatcaaatgaggtttttgatcttcttt
gatgacggctacgcttcctacgtgaacctaccagacctcttccctgtgtgcagaccaatg
aaacgtacatgggaggacatcgaagacacgtcgtgccgagatttcattgaagagtacatc
acagcatatcccagcaggccgatggtgctcctcaaagtgggccagatcatcaaaacagaa
tgggagggaacctggtggaagagtaaagtcgaagaagtggatggcagcttggtcaagatt
ctttttctggatgataagaggagtgagtggatctacagaggctccaccaggttggagcca
atgttcaatttgaagatgaccactgccaacacccaggagaagaagctggctggccagctg
agaacacgacccaatatgggtgcattgaggagtaagggccctgttgtccagtacaccagt
gacggtcatgttggcgcctctcccattggagcctctccggttaagagtgtactcccagct
caaactcaacagacaccaacaacctcaccaagcagtcatgtcactcaatcgtcacgtcct
gaaagcagcaaacatcagatggccaagaagagtacttctcctttcgttccaggtgtaggc
ggcactcatgcttccaaagttatgcagtctctcacctccagccctggcaacatgccaaga
ataaacagtcccgcagtgagtaccagcccagctcatttgcaacccagactggtgaccact
cctgccaccccgcccataatgccccacccagtagccaccattccgcaccagccgtcctac
cgcgcccctgccgaccgtatcttctacatggagcacatttgccagccggcttgtttgaac
cgcgttcggccggcaaagccggacattcaccggggaaagaaccctctcctcataccgctg
ctgtacgacttcagacgcatgacggggcggcgcaaagtcaaccgcaagatgactttccat
gtgatctacaaagccccatgtggcctctgcctacgtaacatggccgagatccagcggtac
ctcttccagactacctgtgacttcatctttttggaaatgttctgtctcgacccctacgtg
ctggtggaccgcaattttcagccgctgaggcccttctattacatcccagacatcactgga
ggaaacgaggatatcccgctctcctgtgtcaacgagattgattccacaccaccccctcaa
gttgcctacagcaaagagcgcattcctgaagacggagtgtatatcaacacaagtacagac
ttcctggttgggtgtgattgcaccgatggctgtcaggacaagtccaaatgttcttgccac
cagttgacactacaggctaccggttgcactccgggaggacaaataaacccaaatgctgga
tttcttaacaagcgcttagaggagtgcctccccacaggtatctacgagtgtaataagcgg
tgcaagtgttgctctcaaatgtgcaccaaccgattagtgcagcatggtctgcaggtgcgt
cttcagctcttcaagacccagaacaaaggctggggcatccgctgcttggacgacgtggcc
aaaggctcgttcgtctgtatctatgctggtaaaatcctgacagacgactttgctgataaa
gaaggcttagagatgggcgacgagtattttgctaacctggatcatattgagagcgtagag
aacttcaaagaaggctacgagagtgaggctcactgttctgacagcgagggcagcggtgtg
gacatgaccaggttaaaaatccaaccgtctgccttagtgactaactccttcggacggcag
ggcaaaaaggctgggagctctaggtcatccgaggaaagcaacgatgaggaagagaaagaa
tcaaagagtgacgagagcgacagttcagacgacacgtttgtcaaggacacctacttcagc
agcagctctgtgtggaggagttataccacccgcggacaggctaaaggccacaaggaaggg
agtcaagacagtaaggatggcaatcctaccccgtccaaaggcgaagaaaagtcgctccct
gtgccagaggagatgggaaaaagcaaagtggcatcgtggctcaccagccagggaattaag
aaggaccctggagacaataagagccaagtgaagcccgacatggcaaagaagccggacgtg
acgacgctttcagacagcgatgacgtccaaaccatcagctcaggatctgatgacaacaag
gagaaagagaaagccaccctgggtgtggttaagaagcaggtggctgtgaaatccacccgc
ggcatcgctctaaagaccggtcacggcatgatggtgaaaacgggcgtgcctggagccggg
gtgtcccagggcggcctgggagggaagtcggggcagcagggacagactggcatgggtggg
gagaccggccccagaaacacccgacaattcttcgacggggaagagtcgtgttacatcatt
gatgcaaagctggagggaaacctcggccgctacttgaaccacagttgcagtcctaatctc
tttgtccaaaatgtctttgtggacacgcatgacttgaggttcccatgggtggcttttttc
gccagcaagcgcatccgggctggcacggagcttacgtgggattacaactatgaggtgggc
agcgtggagggtaaagtgctgctatgctgctgcggctccaccgagtgtagaggaagactg
ctgtga
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