Syngnathoides biaculeatus (alligator pipefish): 133501431
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Entry
133501431 CDS
T09681
Symbol
tap1
Name
(RefSeq) antigen peptide transporter 1 isoform X1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
sbia04145
Phagosome
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133501431 (tap1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133501431 (tap1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133501431 (tap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133501431 (tap1)
Enzymes [BR:
sbia01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
133501431 (tap1)
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
133501431 (tap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_15
DUF3584
Med29
Motif
Other DBs
NCBI-GeneID:
133501431
NCBI-ProteinID:
XP_061677173
LinkDB
All DBs
Position
5:8105728..8127300
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AA seq
871 aa
AA seq
DB search
MFRKTAFHVTFDFLFPGAVPFLLVTVPYFVLDSSNGDDGFQLGQRRMSREVGGGAAGSDS
PQEAGRFGGVRKAGRGLAGAWTVVHLEKNKGSGDGTRARRTPCHMTRPETCLCTFCWRDT
DPRGRWTPLRAHKNSTYDMSRASTFFFPLLFTCVDVCILRGLRSLQLSPHFSIPCPPLTA
MWTGELIRAVLLLLLLLLLPPRGPSWAGGFGSLQSVLVLCLHLPVYVTLLRALGWGAEEE
MWAWHSWERVFQGYLVMVVSWIYWTQYVQSMVLSLSHFVMSAWRPSCKDQKPKNGTTSSL
RRLLGFMRPHLGYFAVVLLLVGLSSFCEMAVPLYMGQITDWIQNQEKPDVFTEAITMIAV
MTLVSGVLEFIGDLMYNATMSHIHTAVQGDVLQAILNQEIAFFDATPTGELVSRITTDTN
TMSEALSEKLSLLMWYTGRVVFLFYFMVKQSWKMSLLTSLGLPVIWVVPKLTAHFHQALS
VKVQESLAKANQVATETFSCIKTVKSFANEDGETERYTRCMEELYALNKMESVMYAATTS
ANSLTTLVMKVCILYYGGVMVTRGAISSGELVAFVLYELQFASVVDALMQSYPEVKKAIG
GSEKIFEYLDRKPQVPPEGTLAPEHLMGHVQFKNVTFSYSGNNDPDSVILKGVSLEIKPG
KITALVGLNRAGKSTCVRLLERFYQPRGGQILLDGKPLDSYKDAYLRQKISVVSQDCALF
ARSVRENIKYGCSDASDEDMHEAARLASAHDFITGLSKDYDTDAGEKGGQLSGGQKQRIA
IARALIRRPTVLVLDNATSDLDTENEHQVFQALLSQDLNSFSVLLISNKMSVVEKADHIV
VLHQGAVVAEGRHHQLLERSELYARLVKKGA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtttaggaaaacggcgttccacgttactttcgacttcctgtttcccggcgccgttccc
ttcctgctcgtcacggttccctatttcgtcctggactcctcgaatggcgacgacggcttt
cagctcgggcagcgccggatgagccgcgaggtaggcggcggagctgcgggaagtgacagc
ccgcaggaagctggccgcttcggtggcgtgaggaaagcaggtcgcgggctggcgggagca
tggacggttgtccacttggagaaaaacaagggatctggagatggcactcgggctcgacgc
actccctgtcacatgacccgtcccgaaacttgtctttgcactttctgctggcgggacact
gaccccaggggtcgctggacgccactgcgggcacacaaaaattcgacatatgatatgtcg
agagcgagcacctttttcttcccgttgctgtttacgtgtgtggacgtgtgcatcctgagg
ggcttgcgttccctgcagctctcgccacacttctccattccatgcccgccgctcaccgcc
atgtggacgggagagctgatccgggctgtcctcctcctcctcctcctcttgttgctcccg
cccagaggtccctcgtgggccggggggttcggaagtctccagagcgtcctggtcctgtgc
ttgcacctcccggtttacgtgacgcttctccgcgctctgggctggggagcggaggaggag
atgtgggcgtggcactcctgggaaagggtttttcagggctacctggtgatggtggtgtcg
tggatctactggactcagtacgtccagtctatggtgctgtctttgtctcactttgtgatg
tctgcgtggaggccgagctgcaaagaccagaagcctaaaaacggcaccacctcatctctg
aggagattgcttggattcatgcggcctcaccttggctactttgcggtcgtgttgcttctc
gtggggctctcttccttctgtgaaatggcggtccccctgtacatgggtcagattacagac
tggatccagaaccaggagaagcctgacgttttcacagaggccatcacaatgattgcagtc
atgacacttgtcagtggggtgttggagttcatcggggacctgatgtacaacgctaccatg
agtcacattcacacggcggtgcagggagatgtgttgcaggccatactcaaccaggagatc
gctttctttgacgccacccccacaggtgagctggtgtctcgcatcaccacggataccaac
accatgagcgaggcgctgagcgagaagctgagcctcctcatgtggtacacgggccgcgtg
gtcttcctcttctacttcatggtcaagcagtcctggaaaatgtccctgctcacgtccttg
gggttgcccgtcatttgggttgtgccgaagttaaccgcacacttccaccaggcattatca
gtgaaggttcaagagtctttggcaaaggccaaccaggtggccacagaaaccttctcctgc
atcaagactgtgaagagttttgccaatgaggacggcgagacggaacgctacacgcggtgc
atggaggaattgtacgccctgaacaagatggaatcggtgatgtacgccgccaccacttcg
gccaacagcctgaccactctggtcatgaaggtgtgcattctgtactacggaggcgtgatg
gtgacccggggggcgatcagcagcggggagctcgtcgcctttgttctctacgagcttcaa
tttgcttctgttgtggatgccttaatgcaatcctacccggaggtgaagaaggccatcggt
ggctctgagaagatctttgaatatctggaccgaaaacctcaggtaccccctgaaggaacc
ttggccccagaacacctgatgggacacgttcagttcaaaaacgtcacgttttcctactcc
ggcaacaacgaccccgacagcgttatactcaagggcgtgtccctggagataaaaccgggg
aagatcactgcactggtggggctcaacagagctgggaagtccacctgcgtcaggctactg
gaaaggttttatcagccccgaggtggacaaatcctcctggatgggaagcccctggacagt
tacaaagatgcttatcttcggcagaagatctcggtggtaagccaggactgtgcgctgttt
gcccgatctgtgcgggagaacatcaagtacggctgctcggacgccagcgacgaggacatg
cacgaggccgcccggttggccagcgcccacgacttcatcacgggactctccaaggactac
gacacagatgccggtgagaaagggggacagctctctggtggccagaagcaacgcatcgcc
atcgcccgagctttaatcaggcgacccaccgtcttggtcctcgacaacgcaaccagcgac
ttggacactgaaaatgaacatcaggtcttccaagctttactgagccaggacctcaacagt
ttctccgtgctcctgatctccaacaagatgagcgttgtggagaaggccgaccacatcgtc
gtcctccaccagggtgcggtcgtggcggagggccgccaccaccagctgttggaaaggagc
gagctttatgcccgactggtgaaaaagggggcataa
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