Syngnathoides biaculeatus (alligator pipefish): 133501848
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Entry
133501848 CDS
T09681
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133501848 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133501848 (tdg.2)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
133501848 (tdg.2)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133501848 (tdg.2)
BRITE hierarchy
Motif
Pfam:
UDG
AT_hook
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
133501848
NCBI-ProteinID:
XP_061677915
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All DBs
Position
6:complement(29889661..29897599)
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AA seq
435 aa
AA seq
DB search
MEENEFTPLTVPMDYFQQWYQSSQQHPEVHHVMSHHNHYSEGPRDEPVMAELSVHRELPL
HQEQFSHSYSHYQEPVYQQQEEQQRQHPSYLQQQQQQQQQYTVQEQPHYQHPVQQQPQYQ
NITQQEELNVQHQPPPATPPQALTPAKKKRGRPPKNQCEGGGGGGSVKEEEEDASEAAAK
KAKRTLNRFNGMSVAEVMAKTLPDVITYNLDILIIGINPGLLSAYKGHHYPNPGNHFWKC
LFLSGFTEQQLNFTHDESLPEKYGIGFTNMVERTTPGSKDLSSKEIREGGRQLLEKLQKY
KPLIAAFNGKGIYEIFCKEIFGVKSKNLDFGLQPYKIPDTETVCYLMPSSSPRCAQFPRA
QDKVHFYIKLKELRDHMKGAAPIRDVLETDYSFDLQQAKEDAKRIAIKEEQMDPEYESCS
GQHGNVRQSNPGNFY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaacgagtttacgccgttgacggtacccatggattatttccagcagtggtac
cagtcgagccagcagcaccccgaggtgcaccacgtgatgtcccaccacaaccactacagt
gaaggccccagggacgagcccgtcatggccgagctgtcggtgcacagggagctgccgctc
caccaggagcagttttcccacagctactcccattaccaggagcccgtctaccagcagcag
gaggaacagcaacgtcagcatccatcttacctgcagcagcagcagcaacaacaacaacaa
tacacagtacaagaacagcctcactatcaacatccagtacaacaacagcctcagtatcaa
aatataacgcagcaagaggagctcaatgttcaacaccaacctccacctgcaactccacct
caagcgttgacgccggcgaagaagaaacgaggtcgtccgccaaagaatcagtgcgaagga
ggaggaggaggcggatcggtgaaagaggaagaggaggatgcgagcgaggcggcggcaaag
aaagccaaaaggaccctgaaccgcttcaacggcatgtcagtggctgaggttatggccaaa
acgctgcctgacgttattacctacaatcttgacattttgatcatcggaattaacccggga
ctattgtcggcctacaaaggacaccattaccccaaccctggaaaccatttctggaaatgt
ttgtttctgtctggtttcaccgagcagcagctgaacttcacccatgacgagagcctgccg
gaaaaatacggcatcggcttcaccaacatggtggagaggaccacgcccggcagcaaagac
ctttccagtaaggagatccgcgaaggagggcgacagcttctcgaaaagctgcaaaagtac
aagccgctaatagcggcttttaacggaaaaggtatttatgaaatcttctgcaaggagatc
tttggtgtgaaatccaagaacctggactttggcttgcagccctacaaaatcccagacact
gaaaccgtttgctacttgatgccgtcttccagtccgcggtgtgcccagttccctcgagcg
caggacaaagtgcacttctacatcaagctgaaggagctgcgagaccacatgaaaggcgcg
gcgcccatccgcgacgtgctggagaccgactactccttcgacctgcagcaggctaaagaa
gatgcaaagaggatcgccatcaaagaggagcagatggacccagagtatgaaagctgtagc
ggtcagcatggaaatgtgaggcaaagcaatccaggcaacttttactga
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