Syngnathoides biaculeatus (alligator pipefish): 133507239
Help
Entry
133507239 CDS
T09681
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133507239
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133507239
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133507239
Multi subunit Ring-finger type E3
KPC complex
133507239
BRITE hierarchy
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
133507239
NCBI-ProteinID:
XP_061688062
LinkDB
All DBs
Position
10:complement(28092147..28120488)
Genome browser
AA seq
1360 aa
AA seq
DB search
MNTNDDDDDDNPNSKCPRRSGGALLSLYRTSVNPFGVNNTAEAKVATGPPADSMSSKGGG
AALSRRTYGLASDPDKPKSAGIVNEKLLSDYLHHVFPSANQTAAPAYLRKPLAFQDLDAH
LQTLLSEGESADDGPDHEVEGRLGPQPVVLDHTSGFEGLLFVDDDLLGVIGHSNFSSIRA
TTCVYKGKWAYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVRKWNVVTT
NYGKSWAAGDIVSCLIDLDDATIAFCLNGQSLGTAFSDIKTGPGVAYFPAISLSFKESVA
FNFGSRPLRYPAEGYLPLQDPPTADLLKAHKLLGFVKNVLSTRIDAQEERVVETDCSVWR
LHGEASVLITLAHIFNHFAPLMCKVYLVEDVLMNFLLGILEGGGSVDEHPLIQQLLDLFW
LLMEDYEVSECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKSRKYLLSNLT
FDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTHFDKEGKDEREPKDESSDERLRRRAY
ERGCQRLKKRIEVVEELQVQILRLLLNNKDKSAGEASRYIFLNKFRKFLQENASNRGHPT
ALCPPEYMLCFLHRLITAVRACWDESAKKSPAGVRSDAAYVPPQLFYNGKVDYFDLQRLG
GLLSHLKKTLKDDLASKANIIIDPSEIQAASMDDLDEDEENGAVQRTAGASSGAAPVRPG
WLSSPTLGRANRFLSTAAVSLMTPRRPLGQPEKVKVRPLAVEQRTEDDIEGSHGNDGLLL
GRPAEESDQPVADKSLLEITDGIVMMYNLSVHQQLGKMVAVADDVHEYAAALKDTDEKMA
RCPARRPDILEELHKSRKVFAEKLNHLSRRLAWINATIYSKEKMLDVYWLLCVCVRTIEH
GDRTGSLFAFMPEFYLNVAMYAYNALKNYFSPASNMEQLPGYEETLTQLAAILAKHFADP
RIVGTDIKDALMQALASYVCYPQSLRAVERIPEDQRVAMMRNLLAPYEQRPWAQTNWILV
RLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSLLLQRHMARLLSADKDMAAAFLN
SVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLLRVLEMTVTL
VPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAEKNLFDRVVNLRLPGLESVDHYPILVA
VTGILVRVLVDGDRQGTCRAACVLLSDPCFQLHSIQNLLSEPGRPEAPPPPSPVNPSERK
HFSLNAYSDYISAEEKNKVERMLVFLARESQQAATSAQPTSEDDLCPICYAHSISAIFKP
CSHKSCKACINQHLMNNKDCFFCKATITGVDDYRKPPASS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaacgacgacgacgacgacgacaacccaaattcgaagtgcccacgtcgatct
ggcggagctttgttgtctttgtaccgtacttccgtcaacccgtttggtgttaacaacacg
gcagaagccaaagtggccacaggacctccagcggacagcatgagctccaaaggcggcggc
gccgctctgagccgccgcacctacggactggcttcagatcccgacaaacccaaatccgca
ggcatcgtgaacgagaagctgctcagcgactatttgcatcacgtgtttccttccgccaat
cagacggctgctcccgcctacctcaggaagccgttggcgttccaggatctcgacgctcac
ctgcaaacgttgttgtccgaaggggaaagcgctgatgatggcccagatcacgaggtcgaa
ggtcgtctgggtccgcagccggtggtcctggaccacaccagcggcttcgagggacttctg
tttgtggacgacgacctgcttggggtgatcggccacagcaacttcagctccatccgagcc
accacttgcgtgtacaaaggcaagtgggcgtacgaggtgctgatctcgtctcagggtctg
atgcagatcggctggtgcacgctcaactgccgcttcaaccaggaggagggcgtcggcgac
acgcccgattcttacgcctacgatggaaaccgagtgcgcaaatggaacgtggtcaccacc
aactacggcaagtcgtgggcggcgggcgacatcgtcagctgtctgatcgacctggacgac
gccaccatcgccttctgccttaacgggcagtcgctgggtacggcgttcagcgacatcaag
actggtcccggcgtggcctacttccccgccatcagcctgtccttcaaggagtctgtggcc
ttcaacttcgggagccgaccgctcaggtatccggccgagggctacctccccctccaggac
ccccccaccgccgacctgctgaaggctcacaagctgctgggcttcgtcaagaacgtcctg
tccacacgcatcgacgcgcaggaggagcgcgtggtggagacggattgttcggtgtggagg
cttcacggcgaagcgagcgtcctcatcacgctggcgcacatcttcaaccactttgctcct
ctcatgtgtaaagtctacctggtggaagacgtgctgatgaacttcctgctggggatcctg
gagggcggcggttctgtggacgagcatcctctcatccagcagctcctcgacctcttctgg
ctcctcatggaggactacgaggtgagcgagtgtctgaagcagctgatgatgtcacttctg
agggcgtaccgcttctcccccatcatccccgacctcggcttccagatccactacctccgt
ctgacaacagccatcctgcgtcatgagaagtccaggaagtacctgctcagcaacctcaca
tttgacgtgctgcgttcggtggtcttcttctacatcaagaccccgctgcgcgtgaaggag
gcggggctggaggagctgatccccaccacctggtggcccacgcacttcgacaaggaggga
aaagacgagcgcgagcccaaggacgagagttcggacgagcgtctgcggcgacgggcttac
gagcgaggatgtcagaggctgaaaaaaagaattgaagtggtggaagagctgcaagtgcag
atcctccggctgctgctcaacaacaaagacaagagcgcaggcgaagcctcccgctacatt
ttcctcaacaagttccgcaagttcctgcaagagaacgccagcaacagagggcatccgacg
gccctgtgcccccccgagtacatgctgtgcttcctgcaccgtctgatcacggccgtgcgc
gcctgctgggacgaaagcgccaagaagagtccggccggcgtccgcagcgacgcggcgtac
gtgccccctcagctcttctacaacggcaaggtggactacttcgacctgcagaggctggga
ggcctgctgtcgcacctcaagaagacgctcaaagatgacctggcgagtaaagccaacatc
atcatcgacccctccgagatccaggcggcgtccatggacgacctggacgaggacgaggag
aacggcgccgtgcagaggacggcgggggcgtcgtcgggcgccgctccggttcggccgggc
tggctgagctcgcccaccctgggccgggcgaaccgctttctcagcacggccgccgtcagc
ctcatgactcccagacgacctctcggccagcccgagaaggtcaaagtgcgccccctcgcc
gtggagcaacggactgaggatgacatcgaaggtagccacggcaacgacggcctgttgctg
gggcgacccgccgaggagtcggatcagcccgtggccgacaaatcgcttctggagatcacc
gacgggatcgtcatgatgtacaacctcagcgtgcatcagcagctggggaagatggtggcg
gtggcggacgacgttcacgagtacgcggcggcgctcaaagacacggacgagaagatggcg
cgatgtccggccaggaggcccgacatcctggaggagctccacaagagtcggaaggttttt
gccgagaagttgaaccatctgagcaggaggctagcctggattaacgccaccatctactcc
aaggagaagatgttggacgtgtactggctgctgtgcgtgtgcgtgcgcaccatcgagcac
ggcgaccgcacaggctcgctgttcgccttcatgcccgagttttacctcaacgtggccatg
tacgcctacaacgcgctcaagaactacttcagtcccgccagcaacatggagcagctgcca
ggctacgaggaaacgttgactcagctggcggccattctcgccaaacactttgcggatcca
cggatcgtcgggacagatatcaaagatgctctgatgcaggcgctggccagctacgtctgc
tacccacaatccctcagggcggtggagaggatccccgaggaccaacgcgtggccatgatg
aggaacctgctggcaccctacgagcagagaccctgggctcagaccaactggatcctggtc
cggctgtggcggggctgcggttttggctacaggtacacgcgcctgcctcacctcctgaag
accaaacccgaggacgccagcctgcccagcctccagaagccgtgcccgtcgctgctgctg
cagaggcacatggcccgcctgctgagcgcggacaaggacatggccgccgccttcctcaac
agcgtcctcaaccagctcaactgggccttctccgagttcatcggcatgattcaagagatc
caacaggcggcggagcgtcctgagaggaactttgtggacacgcgtcagctgaaggtgtgc
gccacctgtttcgacctgtcggtcagcctgctgagggttctggagatgacggtcacgctg
gttcccgagatctttctggactggtctcgcccgtccgccgagctgctgctgcgccgcctg
gctcagctgctgaaccaggtgttaaaccgggtgacggccgagaagaacctctttgaccgc
gtcgtcaacttgcgactgccaggtctggagagcgtggaccactatcccatcctggtggcc
gtcaccggcatccttgttcgagttctcgtggacggcgaccggcaggggacgtgccgcgcg
gcatgcgtgctgctttcggacccgtgcttccagctccactccatccagaaccttctcagc
gagccggggaggccggaggccccgccccctccctctcccgtcaacccctcggagcgcaag
catttctcgctcaacgcgtacagcgactacatcagcgcagaggagaagaacaaagtggag
cgcatgttggtcttcctcgccagggaatcgcagcaggcggcgaccagcgcgcagccgacg
agcgaggacgacctttgccccatctgctacgcgcactccatctcggccatctttaaaccc
tgctcgcacaagtcctgcaaagcttgcatcaaccagcacctgatgaacaacaaggactgc
ttcttctgcaaggccaccatcacgggggtggacgactaccgcaagccccccgcctcgtcc
taa
DBGET
integrated database retrieval system
