Syngnathoides biaculeatus (alligator pipefish): 133507358
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Entry
133507358 CDS
T09681
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein
KO
K25100
Msx2-interacting protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133507358 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133507358 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
133507358 (si:ch1073-335m2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
133507358
NCBI-ProteinID:
XP_061688289
LinkDB
All DBs
Position
10:complement(19687015..19705707)
Genome browser
AA seq
3086 aa
AA seq
DB search
MEGIPRRLHENTDHSNYYPRRFVELFLAKKIPEDCTIGHTLRDIFPVDFSFRLSHSHHLG
FIWISYRNFFPKSSETRERAYDHSPYGHHERSGTFDRQRHYNADYYRERSLFAATGPGSS
AISGSFEASDPHFDSRIRDPFSLATATRRDLYRDDRGRRVDRTYHPRRSRSSHSSQSRHP
SPQRTTGQTSKTAHSPKRAPLSPGRVPRSQSRSRSSSSDSVSSTSSTGSGSDSHSSSSDG
SRARSVQSSAAHAPPQSSMVLDSDEPRRSFGIKVQNLPARSTDTSLKDGLFHEFKKHGKV
TSVQIHGTSEDRYGLVFFRQQEDQEKALSVPKGKLFFGMLIEVTAWNGPETESENEFRPL
DGRIDEFHPKATRTLFIGNLEKTTSREQLFENFQRFGEIVDIDIKKMNGIPQYAFVQYSD
IASVCKAIKKMDGEYLGSNRLKLGFGKSMPTACVWLDGLTSSITEHYLSRHFCRYGHVVK
VLFDRMKGMALIFFNNTDFAQAAVRETKGWKIGGSKIKVDFASQESQLAFFRTMQTSAQD
IRELYEIPPERREDRRPLYHEFTAERAYYETIRTPGLYTEDARREYAARSRDRFPELEHF
QGEHFDPRYHEDPRDYRDYRDPFEQDIRKYTYIQRERERFEADRNRWSPSHHRRPITPAA
SPSPTDRAPRESERRVYSHSSERSGSVSSLSPPHFEKSEKTVVEPTSKSEKIEKSTQPDR
VVGSEKTKRTKRKERGDKAERLKSRKVKGQSPSNPLPATELDTSLEAGTVRGKGPEQDAQ
DRQKYKGDNDSVTGSQFSGTHDSLKSERSETAKGDNSDMDGKSRVKKHIKSETGNDPKDS
SVDSDRLAARKRRFADSSGRTIHQKRSRVEEEDSNQSQDPGVITPYGKDIDSDKHKETPR
RDSRFKSGTQKDLQEDKIPRDKIEGSLDSSESKRLPAHTPSRRLSHEGNADQGSLKEQEH
SAIFKFSGQAAETAKSIKIKEEHVDIDLSQSYRKQMEQNRRLHQQQHRESDKPVKLIKQE
NESEDLEHRSLVHEVGKPPEDVTDNFPSHRQKKLDQFDSEGIKRERVYRSFRQKSEDPDW
NNTSSPGHQFSQHTEEDFDHSQKELARNERNDPDLELLVKRTHSTHVNKSNTVNAEEEQQ
KRWESRVKRNMLPDINFSRNLGKNVQNRKRMEFGVWHDIEPGEVRSDSEEDREAEPRSPV
ASTSKSFSERPRGERFSDPKTAHLERNKFYSFALDQTITPDTKALLERAKSLSSSREDNW
SFLDYDSHFASFRNRKDTEKIESTPRPTPSWYMKKKKIRSGSEDKLDDRKVEPKPEEQER
RELFASRFLHSPVFELDSRRLQHLERKHEEAEHGQNQQGTGDEVDSAPVVLFHSRFLELT
RLQQQKNKTQPEEMMDEIKIEKVSTEETQILQSPEPKESIIEPEIKPISPAEDSVSESRV
TTPVSQTLLKEFPPVEQSSLPTEPSSIFIKEEKEHVAVEYSLIEPTTDSEDASIKQEASF
GTDVYKLSPFEIKEEDVRTEDVKPDVEEQSSGNLHEFVSPSEPELDCEAAQSEIPPLIIS
AITTHGECNDLAKKEMYCTVSESEEEKTVKVTKESGDDINIVGNSANKEYKTKEMKTKKG
RPPAVEVASTVVSVSAPEKQATRKSERIDKEKLKRGSSPRAESKSTGKSPLHGSDADVSE
QSISSGRARRRNVKSVYATPVEDDTQCRTAKDIQESPRSARKRGTDKDATQQQNNEQDLP
PPTPTAKRGRPPKNRKLSEDASAVKVDKIRTETKSTEPNESEGCEKIPRNLKGKSSPSAT
KSTTIQVPTAQLCGSTRKGEKNEVTEANDQEMDGADDRTLTLVDSSKEAQSSEVDQKKEE
KDKHKKETFRDSTALNEKMYEVKSNGKEEFPSVLEEKSTIEKEKLVKGKKLPRTPKSPVL
KNLKIRLNVKEVKDHVSKCTGRGGNNEDGDVSLEKNEHLETSKSLTSHEMELEQAVENIA
KLTDPPFPREPQTLTGPITDLKSFSDEEKPNPASETELIAAIDSITAEDVAVSLSQAPPI
GVDITSEPHMQDSVQPAKEGEPEMNTVNIQEEPLLPAISKKGTKGRPKTTKRPKSQKTRK
DSKEQPPPNEETSTVLVQNAASVKIVPEMIPSAATAAVITPTTWKPEQEPLAVKAPEKVE
SESPPEELIQHIKTVYPQSKSPVGPKPQSPSLSPLACRPNIKPIQNSRAPVSPPDWLHHS
VDAGVPPLPALPLAHKESQPSSDSENIDIDRDLRQILLKHKTISLPGSSYAPTNLPTVQD
KNLSERTTTLPVVPNKLPLPDCRMSPQSVRTPATLPSPETKSVISVIASTALHSSVISRV
CNPPEHDEKVNLNIGNQGADMALPKPNYRPSKDDPGSYHGPTIVDEGASAKRFIVESSTL
GTGSCPGLRVNTSEGVVVLSHSGQKTEGPQRISAKISQIPQATVGEMESQQLVSMPQMKQ
EMYVHPQSGIQKGSLQTDHGHPGKTQSTFSSNKQEGTGLEKMEPTYHSGPQGVVKRLTQG
VGNQSMSSMYHQEYLPTKHQKKIDSGDSHGADGSKASWASAISPAISPHLPSPPGNHVGF
VTAAGDRPPSHLGGIKQEPRSPRKSNHPHSPFTKVSSPIGSSSPKGIPVMLPTGLPAMPQ
FITGVHHPEQSVIMPPHSVPGALGRMSPHPATQSIPVGHLVQGDVRVNTPPLSVMSYGMH
SESLPSPWSGSMQQRPTSPQTVGRDKVLKVNPSALRSHDIDQEESRRFHQPGRQPATQLK
PETMQSDPRGSFRSGVPMEAYMAQREMRALQHQQGERSSTDPHSGHLQETHPPTSAPSSL
PMSLSPRAHILPKSVSEKDIAKPLEAKRPHSPLSKDGLIGIRQAGPTISSPQRVTIMPPG
LSGAFPEYSQMYSNPRTIHSQMPDATHVVPDGKIAQPVNMVQLLTKYPIVWQGLLALKND
TAAVQLHFVCGNKALAHRSLPLQEGGAFLRIVQRMRLEAPQLESVARRMTGECDFCLLLA
LPCGRDQDDVLNQTQALKAAFINYLQTKLAAGIINIPNPGSNQPAYVLQIFPPCEFSESH
LSQLAPDLLNRISSISPHLMIVITSV
NT seq
9261 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtatcccaagaagacttcacgagaacacggaccattccaactactatccacgg
aggtttgtggagctattcctggccaagaagattccagaagactgcactattggacataca
ctccgggatatttttcctgttgatttttcattccggctctcgcattctcaccacctaggt
tttatttggattagttaccgtaacttctttccaaaaagctcagaaacccgcgaacgtgca
tatgaccacagcccctatggacaccacgagcgcagcggcactttcgacagacagcggcac
tacaacgccgactattacagggagcgctctttgttcgctgctaccggtccagggagcagc
gccatcagcggaagctttgaggcgtcagacccccattttgactctagaattcgagaccct
ttctctctcgcgactgcaacacgtcgggacctctacagagatgacagaggccggcgcgtt
gacagaacgtaccatccccgtcggagccggtcgtcccattcctcacagtctcggcaccct
tctccccagcggacaactggtcagacctccaaaaccgctcattcccctaaacgagcacct
ctatcccccggaagagtccctcgatctcaatcccgcagcagatcgtcaagctccgattcc
gtgagcagcaccagcagtacaggcagcggcagcgattcccacagcagttcaagcgatgga
tcacgagcgcgttccgttcagtcgtcagctgcgcatgcaccgcctcagtcgtcaatggtg
cttgactccgatgagccacgtagaagctttgggattaaagtgcaaaatctacccgcgcga
tccacagacacaagcttaaaagacggactcttccacgagttcaagaaacacggtaaagtg
acctccgtgcagatccacgggacatcagaagatcgctacggcttggtgttcttcagacag
caagaggatcaagaaaaagcccttagcgtcccgaaaggaaaactgttctttggtatgctg
attgaagtcacggcgtggaacggtcccgaaacagagagcgagaatgagttcaggccgctg
gatggcaggatagatgaattccacccaaaagccacaagaacgttatttattggcaacctc
gagaagacaaccagccgtgaacagctttttgaaaattttcaacgatttggagaaattgtc
gacattgacatcaagaaaatgaacggaattcctcagtacgcatttgttcagtattctgat
attgccagtgtttgcaaggccattaaaaagatggatggcgagtatcttggcagtaataga
ctaaagcttggttttgggaaaagtatgccgacagcgtgtgtttggctcgatgggctgaca
tccagtataacagagcattacctctctcggcatttctgtcgttacggacatgttgtcaag
gttttatttgacagaatgaaagggatggccctcatcttcttcaacaacacagattttgct
caggctgctgtgagagagaccaaaggctggaagattggaggcagcaagattaaggtggac
tttgcaagccaagagagtcagctggcattcttcagaactatgcagacatctgcgcaagac
attagagagctttatgaaattcctcctgaacgaagggaggatcggaggcccctgtaccac
gaatttacagcagagagggcttactatgaaacgatacgcacgcctggcctttatacagag
gatgctcgaagagagtatgctgctcgcagtagggaccgtttccctgaattggaacatttt
cagggggaacactttgacccacgttaccatgaagacccacgggactacagggactatcga
gatccctttgagcaagacattcgaaaatacacatatattcaacgagaacgagagcgtttt
gaagcagaccgaaatagatggagtccctctcatcatcgccggcccattacacctgccgcg
tcaccatcaccgactgatcgtgcgccgagagaatccgagcgccgggtttatagtcactcg
tctgaaaggagtggtagtgtaagctcactttcacccccacactttgagaagtctgaaaag
actgtggtagagcctacatcaaagagtgaaaagattgaaaagagtactcaacctgataga
gtcgtgggctctgaaaaaaccaagcggaccaaacgaaaagagagaggcgacaaagcagag
agactcaaatcaaggaaagtgaagggccaatctccatccaatccacttccggccacagag
cttgatacctctctggaagcaggcaccgttagaggaaagggacctgaacaagatgcccaa
gataggcagaaatataagggggacaatgactctgttactggaagtcagttctcagggacc
catgactccttgaaaagcgagagatctgaaacggctaaaggtgacaattctgatatggat
ggaaaaagtcgagtcaaaaaacatattaagtctgagactggaaatgatccgaaagactca
tcagtggattcagatcgccttgctgcaaggaaaaggcgctttgctgattcaagtggaagg
actattcatcaaaagcgaagcagagttgaagaagaggattctaatcagtcccaagaccct
ggcgtgattacaccgtatgggaaagatatcgactctgataagcataaagaaaccccacgc
agagattcaagatttaaaagtggaacacagaaggaccttcaagaggacaaaataccaagg
gacaaaatagagggttcgttggattcttccgagtcaaaacgactcccagcccacactcca
tcacgaagattatcacacgagggtaatgcagaccaagggtctttgaaagaacaggaacac
agtgctattttcaaatttagtggtcaggcagcggaaactgccaaaagcattaagattaag
gaagagcacgtggacattgacctgtctcagagttaccgcaagcaaatggagcaaaataga
agattgcatcagcaacaacaccgagaatctgacaaacctgtcaaacttatcaaacaagaa
aatgaaagcgaggatctggaacaccgtagtcttgtgcatgaagttgggaaaccacctgaa
gatgtcacagataatttcccatctcacaggcaaaagaaactggatcagtttgacagtgaa
ggaatcaagagggagcgtgtttataggagcttcaggcagaaaagtgaagatcctgattgg
aacaacacgtcttctccaggacaccagttttcgcaacatacagaggaggactttgatcat
tctcagaaagagcttgccagaaatgaaagaaatgaccccgatttggagctgcttgtcaaa
aggacacatagtacccatgtcaacaaatccaacacggttaacgcagaagaggagcaacaa
aagaggtgggagagcagagtgaagcgaaacatgctacctgacataaacttttctagaaat
cttggtaaaaatgttcaaaaccgcaaacgcatggaatttggtgtttggcatgatatagag
ccaggggaggtgagatctgactctgaggaggatcgagaagctgagccccgttctcctgtg
gcatccacttcaaagtctttttcagagaggccgaggggtgaaagattttcagacccgaaa
acagcacatcttgaaaggaataaattctactcctttgcacttgaccagaccatcacacca
gatacaaaggctctgcttgagcgtgcaaaatccttgtcatcttccagagaagataactgg
tccttcttagattatgattctcactttgcaagttttcgaaatcgcaaagatactgagaaa
atagaatcaacaccgcggcctacaccttcgtggtacatgaaaaagaaaaagatccgcagt
ggatctgaagataaacttgatgatcggaaggtagagccaaagccggaggaacaagaacga
agagagctgtttgcctcccgcttccttcacagccctgtttttgagttagactcaagacga
cttcaacatctggaacgaaaacatgaagaagctgagcatggtcaaaaccagcaaggaaca
ggagatgaagttgactcagccccagtcgttctgttccatagtcgttttttggaacttaca
agactgcagcaacaaaagaataaaacacaaccggaggaaatgatggatgaaataaaaatc
gaaaaagtatcaacagaagagacacaaattttgcaatcaccagaacctaaagaatctata
attgaaccagaaattaaacccatcagtcctgctgaagactcggtgtctgaatccagggta
acaacgcctgtctcacagacattgctaaaagagtttcctcctgttgagcaatcgtcttta
cccactgaaccatcttctattttcataaaggaagaaaaagaacatgtggctgtggagtat
tcactaattgagcctaccactgattcagaagatgcatccatcaaacaagaagccagtttt
ggaacagatgtttataagctttctccttttgaaattaaagaggaggatgttaggacagaa
gatgtcaaacctgatgtagaggagcagagtagcggcaatttgcacgagtttgtcagtcct
tcagaaccagagcttgactgtgaagcagcgcagtccgaaatccctccacttataatttcg
gcaataactactcatggtgagtgtaatgacttagcaaagaaagagatgtattgtacagtt
tcagagtctgaggaagaaaaaacggttaaagttactaaagagtccggcgatgacataaac
attgtaggaaactctgctaataaggagtataaaacaaaagaaatgaaaacaaaaaagggc
agaccacctgcagttgaagttgcttcaactgttgtctctgtatctgctcctgaaaaacaa
gccacgagaaagagtgagcgcatcgacaaagagaaactgaaacgcggctcctctccaaga
gcggaatctaagtccacgggaaaatctcctcttcacggatcagacgccgatgtctcggag
cagagcatatcgtcgggcagagcgagacgtagaaatgtgaagtctgtgtatgcgacccca
gttgaagatgatacgcagtgtcggactgcaaaggatattcaagagtcgccgcgttctgcg
aggaaacgtggcacggacaaggacgctacacagcagcagaacaatgagcaagatttacct
cctcccactcctacagctaaacgaggccggcctcctaagaatcgtaagctaagcgaggac
gcttccgcggttaaagtggacaaaataagaacggaaaccaaaagcacggaaccaaatgaa
tctgagggttgtgagaagatcccgagaaatttgaagggaaaatcctcccccagtgccacg
aaaagtacaacaattcaggtgcctacagctcaactatgtggatcaacaaggaaaggggaa
aaaaacgaggtgacggaggccaatgatcaggaaatggatggcgctgatgaccgtaccctg
actttggtagactcctctaaagaagcccaatcatctgaagttgaccaaaagaaagaggaa
aaagacaaacacaaaaaagaaacgttcagagacagcactgctctgaatgaaaagatgtat
gaagtgaaatcgaatggtaaagaggaatttccctcagttttagaagaaaaaagcaccata
gaaaaagaaaagcttgtcaaaggaaaaaagttgccgaggaccccaaagtctcctgttctc
aagaaccttaaaatcagactaaatgtcaaagaggtgaaagatcatgtttcaaagtgcacc
ggcagaggggggaacaatgaagacggtgacgtttctttggaaaaaaatgaacatctggaa
acatccaaaagtttaacttcacacgagatggaattggaacaggccgttgagaacattgcc
aaactcacagatccgcctttcccgagagaacctcaaacactaactggcccaataacggac
ttaaaaagtttctcagatgaagaaaaacctaatccagctagtgaaacagaactcattgct
gccatcgactcaatcaccgctgaggatgtagccgtctctttatcccaagcaccacctatt
ggggttgacataacttcagaaccacacatgcaagactcagttcagcctgctaaggaaggc
gaacctgaaatgaatacggttaatatccaggaagagcctctcttaccagccatttccaaa
aaaggcactaagggaagacccaagaccactaaacgtccgaaaagccaaaagacacgtaaa
gattcaaaagaacaaccgccaccaaatgaagagacttcaactgttttagttcagaacgca
gccagtgtaaagattgtcccagaaatgattccttcagcagctactgctgctgtaatcaca
cctactacatggaagccagaacaggagcctttagctgttaaggctcctgaaaaagtagag
tcagagtcacctcctgaagagctgattcaacatatcaaaactgtttacccgcagtccaaa
agtccagtaggcccaaagccccaatcaccttccctgtcaccgttggcatgcagaccaaat
attaagcctattcaaaacagtagagcaccggtctctccaccagattggctccaccactct
gtggatgcaggagttcctcctttaccggccttgcctctcgcacacaaggaaagccaacct
tcatctgactctgaaaatatcgacattgatcgcgatctgcggcagattcttttgaaacac
aaaactatttctctgccgggaagtagttatgcacctaccaatttgcccacagtccaagat
aagaacctctctgagcgtaccactactttaccagttgtgccaaataaattaccactgccc
gactgcagaatgtcacctcagtccgttcgaacaccagccacactgccgtctcctgagacc
aagtctgtgatctctgtcattgcgtccactgcactgcactcctctgtcattagtcgtgta
tgcaaccctcctgagcatgacgaaaaagtgaacctaaatattggaaatcagggtgctgat
atggctctccctaaacccaactacaggcccagcaaagatgatcctggctcataccacgga
ccaactattgttgatgaaggggcaagcgctaaacgttttattgttgaaagttccactctt
ggtacaggttcttgcccaggtctcagggtaaatacctctgaaggagtagtggttttaagc
cactcgggacagaaaactgagggaccccaaaggataagtgcaaaaataagtcaaattcca
caagcaacagtgggggaaatggaatctcagcagcttgtatcgatgccccaaatgaaacag
gaaatgtacgttcatcctcaatcaggcattcaaaaagggtctttgcagacagatcatggt
catcctggtaaaacccagtcaaccttttcttcgaataagcaagaaggcacaggtttggag
aaaatggagcctacctaccactctggtcctcaaggtgttgtaaagcgtctcacacaggga
gtcggtaatcaaagtatgagctcgatgtaccaccaggagtaccttccgacaaaacatcaa
aagaaaatcgatagtggagattctcatggcgcagatggttctaaggcatcatgggcttct
gctattagtcctgcaatcagtccccatttgccctctcctcctggaaaccacgtaggcttt
gttacagcagctggcgacagacctccttcgcatctcgggggcatcaaacaggagccgcga
tccccgcgcaagtcaaatcatccacattctccatttactaaagtgtcctcacccatcggg
tcttcatcacctaagggcataccggtcatgttgcctaccgggcttcccgccatgccacag
ttcatcacaggcgtgcatcatccggagcagtccgtcatcatgccgcctcatagtgtcccc
ggagcgttgggccgaatgtcacctcaccccgctacccagtcgattccagtgggacatctc
gtccagggagacgttcgggtcaatacacccccactctctgtgatgagctacgggatgcat
agtgagtcgcttccctctccctggtctggttccatgcagcaacgacccacttccccccaa
actgttggcagggacaaggtcctcaaggtgaacccaagtgctttaaggagtcacgacata
gaccaagaagaatcgagacgctttcaccagccagggcgtcaacctgccacacagctaaaa
ccggaaaccatgcagtcagatcctcgggggagtttccgaagtggtgtgccgatggaagcg
tatatggcgcagagagagatgcgtgcgctccaacaccaacaaggagagcgttcgtccact
gaccctcattcggggcaccttcaagagactcacccccccacctctgcgccttccagttta
ccaatgtctttgtctccgagggcacacattctgcctaaaagtgtttctgagaaggatatc
gcgaagccattagaggctaaaaggccccactcccccctttctaaagatggactaattggg
atccggcaggcgggccccacaatctcgtcaccccagagggttacgatcatgcctccggga
cttagcggcgccttcccagagtactctcagatgtactcaaacccaaggaccatccattcc
cagatgcccgatgcgacgcatgtggttcctgatggcaaaatcgcgcagcctgttaacatg
gtgcagttgctcacaaaatacccgattgtctggcaagggttacttgcgctcaagaacgac
acggctgcggtccagttgcattttgtgtgtggcaacaaagctttggctcatcgatcgctg
cccctccaggaaggcggcgccttcctcagaattgttcagaggatgagactggaggcgcct
cagctggagagcgtcgccagaagaatgacgggggagtgcgacttctgtcttttgcttgct
ttgccctgtggacgagatcaagacgacgttctgaaccagacccaggctctaaaggcggcg
tttatcaactacctgcagacaaagttggcggccggcattattaatatcccaaatccaggt
tccaatcagccggcctacgtactgcagattttcccaccatgtgaattttccgagagccac
ttatcccagctggcccccgacctcctcaaccggatctccagcatctcccctcacctcatg
atcgtcatcacctccgtgtga
DBGET
integrated database retrieval system
