Syngnathoides biaculeatus (alligator pipefish): 133507490
Help
Entry
133507490 CDS
T09681
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133507490 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbia01007
]
133507490 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbia03016
]
133507490 (iars1)
Enzymes [BR:
sbia01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
133507490 (iars1)
Amino acid related enzymes [BR:
sbia01007
]
Aminoacyl-tRNA synthetase
Class I (U)
133507490 (iars1)
Transfer RNA biogenesis [BR:
sbia03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133507490 (iars1)
Prokaryotic type
Other AARSs
133507490 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
PriX
ubiquitin
DUF4238
Motif
Other DBs
NCBI-GeneID:
133507490
NCBI-ProteinID:
XP_061688549
LinkDB
All DBs
Position
10:complement(17462073..17520092)
Genome browser
AA seq
1268 aa
AA seq
DB search
MVEPVPESINFPSQEEKILQLWKEKDCFNECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGITGPDDVAKMGIAEYNKQC
RNIVMRYSHEWEVSVNRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVNFPLLDNEEVSLLAWTTTPWTLPSNLALCVNP
ELSYVKVQDNITNKTYIMMESRVGALFKLESEYTLLDKFPGKTLRGKKYKPLFNYFAKCG
ERGAFQVVTDNYVKEEEGTGVVHQAPYFGADDYRVCTEYGIIQRDQAPICPVDASGCFTS
EVTDFVGQYVKDADKNIIKWLKEKGRLVNASTFKHNYPFCWRSDTPLIYKAVPSWFVRVE
HMVQKLLDNNGQCYWVPDFVREKRFGNWLRDARDWAISRNRYWGTPIPMWVSDDYEEVVC
VGSIGELEELTGVKVTDLHRESIDHLTIPSRSGKGVLRRITEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQSYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDSIQFLYNENTAKQSDNIMDKWIQSFMQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRNLVDLTSLEEKDTGSIHYLMLPQVRENLIDKRIENAVSQMQSVIDLGRVIRDRKT
LPVKYPLKEVVVIHQDSDALKDIQSLQKYILEELNVRQLTISTDKDKYGIRLRAEPDHMV
LGKRLKGAFKAITAAIKELTSEQLEAFQKKGSIMVDGHELHEEDLRLMYTFDQSCDSAAQ
YEAHSDAQVLVLLDVSPDQSMVDEGVAREVINRIQKLRKKACLVPSDEITVYYRCQPDGE
YLGSVIQAHTDFILATTKAPLLPYPVPKGVGVIIQEKTQLKGSDLELTIVKGSSPPRAAL
NGPACAYVNLRVKVNGKEKDGVVLLENPKGDNGLDMDKLKIVCSSIFGINNAKLRLFNDG
KELANEANLQALSGKTLTVMTDEASPGAATSVSALVCPYVNLILCNAEPAECKTGQVGTL
LLVNPVGQNGLNYSGLLTEAAKVFGLRGRRLRLYLDQDLSQELQADSSVNSLDTKTLFVR
VLPTTADS
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtgcctgaatccatcaactttccctcacaagaggagaagatcctccag
ctctggaaggaaaaggactgttttaacgagtgcctcaaacaatcgaaaaaccggcccagg
tacaccttctatgatgggccaccctttgccacgggtcttccccactacggtcacatccta
gcgggcaccattaaggacatcgtcacccgttttgcccaccagagtggcttccatgtggac
aggcgcttcggctgggattgccacggcctgcctgtggagtatgaaattgataaaaccttg
gggatcacgggccctgacgacgtagccaagatgggtatcgccgaatacaacaagcagtgt
cgaaatatcgtcatgagatactctcacgagtgggaggtctcggtcaaccggatgggcaga
tggattgacttcaaaaacgactacaagacactctacccgtggttcatggagacagtctgg
tgggtgttcaagcagctgtacgacaagggtttggtgtatcgcggcgtcaaggtcatgcct
ttctccactgcgtgcaacacaccactctccaactttgaatcgcaccaaaactacaaggac
gttcaagatccatcggtcattgtcaacttcccgctgctagacaatgaggaggtgtctctt
ctcgcgtggacaaccaccccttggacactgcccagcaacctggccttgtgtgtcaaccct
gaattgtcttatgtcaaagtccaagataatatcaccaacaagacatacatcatgatggag
tcccgggtgggcgctctgttcaagttggagagtgagtacaccctcctggacaaatttcct
ggcaaaacactcagaggaaaaaagtacaagcctcttttcaattactttgccaagtgtggc
gagagaggtgcattccaggtggtgacggataactatgtcaaggaggaagagggcacagga
gtggtccatcaggcgccttactttggagctgatgattatagggtgtgcactgaatacggc
atcatccagagggaccaggctccgatctgccccgtggacgcctccggctgcttcacttca
gaggtcaccgattttgtgggacagtacgtcaaagatgctgacaagaatatcatcaagtgg
ctgaaggagaagggtcgccttgtcaatgccagcactttcaaacataactacccattctgc
tggaggtcggacacccccctaatctacaaagccgtgcccagttggtttgtccgtgtggag
cacatggtgcagaagcttctggacaacaatggacaatgttactgggttccagatttcgtg
cgtgagaagcgctttggcaactggctgagggatgcgcgtgactgggccatttctaggaac
cgttactggggcacaccgatccccatgtgggtcagcgatgactatgaggaggtggtgtgt
gtcggctccattggagaactggaggaactcactggagtcaaagtaactgacctgcaccgg
gagagcatcgaccacctgacaatcccctcacgctctggcaaaggtgtcctacggaggatc
acggaggtgtttgattgctggtttgagagcggcagcatgccctatgcccaggtgcactac
cccttcgaaaacaggaaggaatttgaggacacgttcccggcagacttcatcgctgagggc
attgaccagacaaggggctggttctacacgctgctggtactctccacagccctatttggc
aaaccacccttcaaaaatgtcatcgttaacggcctggtacttgctagcgatggacagaag
atgagcaagcggaagaagaactacccggatccaggcctcatagtgcagagctacggcgcc
gatgccctcagattgtacctcatcaactccccagtcgtgagagcggaaaacctgcgtttc
aaagaagagggcgtgcgagatgtgttgaaggatgtcttcctaccgtggtacaatgcctat
cgcttcctggtccagaatgtgcaaaggttacaaaaggaggacagcattcagtttttgtat
aatgagaacactgcaaagcagagtgacaacatcatggacaaatggatccagtcgttcatg
cagtccctcatccagttttttaaggcagaaatggatgcataccgcctgtacacagttgtg
cctcgtctggtcaagtttgttgatatgctcaccaactggtacgtccgtactaatagacgt
cgtctaaagggcgagagtggtaccgaggactgtctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggctgatggctcctttcacacccttcatcacggagatgatg
taccaaaatctgcgtaacctggtcgacctcacttctctggaggagaaagacactggcagc
atacattatctcatgctgccccaagtcagagagaatttgattgacaagcgcatcgaaaac
gctgtctctcagatgcagtcggtgatcgacctggggcgggtcatccgtgacaggaagaca
ctgccagtgaagtatccactgaaggaggtggttgtcattcatcaggactcagacgccctg
aaagatatccagtcgctacagaaatacatcctggaagagctcaatgtgcgccagctgacc
atctcgactgacaaagacaagtacggcatccgtctgcgggctgagccagaccacatggtg
ctgggcaagaggctgaaaggggcgttcaaagccatcactgctgccatcaaggagctcacc
agtgaacagctcgaagccttccaaaagaaaggttccatcatggtggatgggcatgagctt
cacgaggaggaccttaggctgatgtacacgttcgatcagagctgtgactcagccgcacag
tacgaagctcactctgatgcacaggtgctggtgctgttggacgtgtcaccggaccagtcc
atggtggatgagggtgtggccagagaggtcatcaatcgtattcagaagttacgcaagaag
gcctgtttggtgccgtcggacgagatcacagtgtactaccgctgtcagccagatggggaa
tacttgggctcggtgatccaagctcacacggacttcattctggcgacgacgaaggcgccc
ctcctgccttaccctgtccccaagggtgttggcgtcatcatccaggagaagacgcagctg
aaaggttctgacttggagctaactattgtaaagggatcttcgccgccgcgagctgcttta
aacggaccagcgtgtgcttacgtcaacctccgagttaaagtcaacggcaaagaaaaagac
ggggtggtgctgttggagaatccgaaaggtgataacggtttagacatggacaagctgaaa
atcgtgtgcagcagcatctttgggatcaacaacgccaagctcaggctctttaacgacggc
aaagaattggctaatgaagcaaacttgcaggccctgagtggtaaaactttgacagtgatg
acagacgaggcttcccctggggctgccacttccgtcagcgccctcgtgtgcccttacgtg
aacctgattctctgcaacgcggagcccgctgagtgcaaaacaggacaagttggaaccctc
ctgttggtcaacccagttgggcagaacgggctcaactactcaggcctactaacggaggcc
gccaaggtcttcggcctccgcggcagacggcttagactctacctggaccaggacctcagc
caggagctgcaggctgattcttcagtaaactctctggacaccaaaacactgtttgtgaga
gttcttcccaccacggcggattcatag
DBGET
integrated database retrieval system
