Syngnathoides biaculeatus (alligator pipefish): 133508978
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Entry
133508978 CDS
T09681
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133508978
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Protocadherins
133508978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Sde2_N_Ubi_yeast
Motif
Other DBs
NCBI-GeneID:
133508978
NCBI-ProteinID:
XP_061691567
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All DBs
Position
11:30430810..30435539
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AA seq
849 aa
AA seq
DB search
MRHKWAARQSLWWCHLVSLLWGTTDGHSRYSIPEELQRGSAVGNLAKDLGLGVSELHRRK
LRIASEAGKQFFSVDLAKGDLLLTARIDREELCGQRAACVLPLELLLDEPLQLHRADVEI
LDTNDNAPSFATKEKLLKIAELVQPGARFPLESAQDPDVGANSVRSYLISKNDNFKLAIK
THKDGRKIPELVLEKPLDREKMPVHHLILTAVDGGDPVRSGTSEITVTVLDNNDNAPQFE
RQLYEAIVSENATRGAHILQVTATDADEGLNGEIEYSFAEQTPEDILTLFSIDAATGAVT
VGGDLDHESASVHRFDVTARDKGNPKMEGHAGVEIKVMDVNDNAPEIIVTSLTTPVPEDS
AIGTVVALISTRDPDSKDNGKVTLRLTSQSPFQLNPSVSNHYSLVTNERLDRERHEQYSV
EISATDCGKPPLSSAKQILVQLRDVNDNAPVFSQTHYNVFLNENNAPGHILCSVSASDPD
AGQNAKVSYTLLDSKASAAPAASSYVYVNAENGSIYSMSSFDYEKVQVFEVGVEAKDRGS
PSLSSTATVHVFILDQNDNAPAVIYPSPHAASHLRAPRSAKAGHLLTKVTAVDADSGHNA
WITYKVAEATDASLFTLSLYTGEVRTKRAVSEHDDSSQRLIVEVKDDGEPVRSSTVTLSV
LLEDAVSEPASEPHGRRSLSEPGHKGGGGGGRITLYLIVSLASVSVLSLLALLTLAVKCA
KTGGGGAACCPGVGRPRDEKPNRNLHIQLNTDGPIKYVEVLGGDVMSQSQSFRSCVSPGS
EYSDFTLLKPSGTADFKEVIGVLDASLPDSAWTFESQQVSPPFALQTEAGNCSSCAFPQH
FSPTTSSSH
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcggcacaaatgggccgcccggcagtcgctgtggtggtgccacctcgtctccctgctt
tggggcacgacagacggccacagccgctacagcatcccggaggagttacaacggggctcg
gccgtgggaaatcttgccaaggatttgggtttgggggtttctgaactgcatcggcgcaag
ctccggatagcgtcggaggccgggaagcagtttttcagcgtggacctggcgaagggagac
ctgctgctgacggctcggatagacagagaggagctgtgcggacaaagagcggcgtgtgtg
ctgcctttggagctgcttctcgacgagcccttgcagctgcacagggccgacgtcgaaata
ttggacaccaacgacaatgctccgagtttcgcgacaaaggaaaaactgttaaaaatagca
gagctggttcaaccgggtgcacggtttccgttggaaagtgcgcaagatccggacgtcggc
gcgaattctgtgcgctcctatcttatcagtaaaaatgacaattttaaattggcgatcaaa
acccacaaagacggaagaaaaatccccgagcttgtgctggaaaagcccctcgatcgtgaa
aagatgcccgtccatcatctcatcctcacggctgtggatggcggcgacccggtccggtcg
ggcacgtcggaaattacggtgacggtccttgacaacaacgacaacgcgccgcagtttgag
cggcagctttacgaggccatcgtgagcgagaatgcgactcggggcgcgcacattctgcag
gtgacggcgactgatgcggatgagggactcaacggcgaaatcgaatacagttttgcagaa
cagacgccagaagacattctgacgttatttagtatcgacgctgcgactggagccgtgacg
gtcgggggggatttggaccacgaaagcgcttcagtgcacaggtttgacgttaccgcgaga
gacaaaggcaatcccaaaatggaaggccacgctggcgtggaaatcaaagtaatggacgtc
aacgacaacgctcctgaaatcattgtgacgtcactaacgactccggtgccggaggattca
gccattggaacggttgttgctctcataagtacaagagaccctgactccaaagacaacggc
aaagttacgttgcgcctcacctctcaatctccctttcaattaaatccgtcggtctccaac
cactactccttagtgacaaacgagcgactcgatcgcgaaagacatgaacaatatagtgtc
gagataagcgccaccgattgtgggaagcctccactatcgagcgcaaagcaaattttagtt
caacttcgagacgtcaatgacaacgcaccagttttctcccagactcattataatgttttt
ctcaatgaaaataacgctccgggacatattttatgttcggtgtcggcgagcgacccggac
gccggccaaaacgccaaagtgtcctacacgctgctggacagcaaagcgtcagcggcgccg
gcggcgtcgtcgtacgtttacgtgaacgccgagaacggcagcatctacagcatgagctcg
ttcgactacgagaaagtccaagtgttcgaggtcggggtggaggccaaggaccggggctct
ccgtcgctcagcagcaccgccaccgtccacgttttcatcctggaccagaacgacaacgcc
cccgccgtcatctacccctccccccacgccgcctcccacctgagggcgccccgctcggcc
aaggcgggccacctgctcaccaaggtgacggccgtggacgccgactcgggccacaacgcc
tggatcacctacaaagtggcggaggccacggacgcctctctgttcacgctcagtttgtac
acaggggaggtgaggactaaacgcgccgtgtccgagcacgacgactcctctcagaggctg
atcgtcgaggtcaaggacgacggggaaccggtccgctcgtccaccgtcacgctgtccgtc
ctgctggaggacgccgtcagcgagcccgcctcggagccgcacggacgccgctcgctgtcc
gagcccggccacaaaggcggtggcggcggcggcaggatcacgctgtacttgatcgtgtcc
ctggcctcggtgtccgtgctgtctctgctggcgttgctcaccttagccgtcaaatgcgcc
aagaccggcggcggcggggccgcctgctgcccgggcgtcggacggccccgcgacgagaag
cccaacagaaatctgcacattcagctcaacaccgacggacccatcaagtacgtggaggtt
ctggggggagacgtcatgtctcagagtcagtccttccggtcctgcgtgtctcccgggtcc
gagtacagcgatttcacgctgctcaagcccagcggcaccgccgacttcaaggaggtcatc
ggcgtgctggatgcgtctttgccggacagcgcctggaccttcgagagccagcaggtgagc
ccaccgttcgctttgcaaacagaggccggaaactgctcctcgtgcgcatttccccaacat
ttctctcccactacttcttcatctcactaa
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