Syngnathoides biaculeatus (alligator pipefish): 133509123
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Entry
133509123 CDS
T09681
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04020
Calcium signaling pathway
sbia04510
Focal adhesion
sbia04518
Integrin signaling
sbia04540
Gap junction
sbia04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133509123 (pdgfrb)
04020 Calcium signaling pathway
133509123 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
133509123 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133509123 (pdgfrb)
04540 Gap junction
133509123 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133509123 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sbia01001
]
133509123 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sbia04090
]
133509123 (pdgfrb)
Enzymes [BR:
sbia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
133509123 (pdgfrb)
Protein kinases [BR:
sbia01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
133509123 (pdgfrb)
CD molecules [BR:
sbia04090
]
Proteins
133509123 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Adeno_E3_CR1
RIFIN
VEGFR-1-like_Ig-like
EcsB
Ig_VEGFR-1-like_5th
Haspin_kinase
AMP-binding_C_2
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
133509123
NCBI-ProteinID:
XP_061691843
LinkDB
All DBs
Position
11:complement(27049081..27084612)
Genome browser
AA seq
1093 aa
AA seq
DB search
MRGVTVFTLNLTVTILLGLCANVSCLEVTPHDGQFVLGAGSSLMLTCSGSGETTWEFKRN
DVPYFQVEQGLNGVQSYQIVSNGTKSSALSMWNVSWKHTGVYQCTDRQNGERKEVEVFVP
DSQVWFVESAHDMLTKTSEQTTIPCVVTNPKINVSLYEKETDLPVKGLYVPSEGYTAALE
DRTYVCRGELDGVVKQSQAFFVLSIFVPEAIDAYINASKTVLKQGEPLTVNCTAHGAELV
LFSWEFPNREAADVEPLTDILSAMNMRSCLIFPRATLGHSGNYVCHVHESVRGQTDSASV
NITVLEQGFVAIQPAEDCRISARLQENVELKVEVEAYPPPQVSWSKDGTAIKGDKIIMNR
QEHEIRYVSILTLVRVRPEQRGFYTARVTNGDDTKDVSFDLEVQVPSQIKDLTDHHLPGK
RHLVTCVAEGVPTPTIQWYSCDSMLQCNNNTTIWQRLVPKAEVLSIQTNVSHSESRQTSR
VWSRLTFHKPQQVTVRCETSNQAGRVDRRDVKLVSSTFFSQVAVLAAVLALVVIIILAII
ILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLTWEMPRDNLVLGRTLGSGA
FGRVVEATAYGLSHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNVVNLLGA
CTKHGPLYLVTEYCRYGDLVDYLHRNKYTFLQYFAEKNQDEGCVISRGSTPLSQRKGYVS
FGSESDGGYMDMSKDEPCVYVPMLEQMDSIKYADIQPSPYESTYQQDLYQEQAGSRLDLV
ISDSSTLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNE
MFYSALKRGYRMTKPTHASDGVYEIMKKCWDEKFEKRPEFSFLVHSMGNMLTESYKKRYS
QVNDNFLKSDHPAVARTKPRLSPPFSTFSSPSVVALPFPLQPRGQGSSQAQSQDVVPSYN
DYIIPIPDPKPEDAFTEMESESPASSVAPEEETDSVSQDTAETLPEEERLEGTGERDALL
GCTGTPEVEDSFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcgtgactgtcttcaccctcaatttgacagtaacaatcctcctgggtctctgc
gccaacgtgagctgcctggaggtcacgccgcatgacggccagtttgtccttggcgccgga
tcctctctcatgctcacctgctcgggttcgggggaaaccacctgggagttcaaaaggaat
gacgttccttatttccaggtggaacaaggcctaaatggtgtgcagagctaccaaattgta
agcaacggcaccaaatccagcgctttgagcatgtggaatgtaagctggaaacacaccggg
gtgtatcagtgcactgaccgacaaaatggagaaaggaaggaggtggaggtgtttgtccca
gacagtcaggtttggtttgtggagagcgctcatgatatgctgaccaagaccagtgagcag
accaccatcccctgtgtagtcaccaaccccaagatcaacgtatccctctacgagaaggaa
actgacctcccagttaaggggctgtatgtccccagtgaggggtacactgcagcgctggaa
gacaggacttacgtgtgtcgcggcgagctggacggagtggtgaaacagtcgcaagctttc
tttgtcctcagtatcttcgtcccagaagccatcgatgcctacatcaacgcatcaaagacg
gtgctgaagcagggagagccgctaacagtcaactgcaccgcgcacggggccgagttggtc
cttttttcttgggagttccccaaccgggaggcagctgatgtggaaccactaacagacatc
ctgtcagctatgaacatgaggtcctgcctcatcttccctcgtgccacgctcggccacagc
ggaaactatgtgtgccatgtccacgagagcgtccggggccagacggactccgccagtgtc
aacatcactgtgctcgaacaaggctttgtggcaattcagccggctgaggattgtcgcatt
tcggctcggctgcaggagaacgtcgagctgaaggtggaggtggaagcctaccctccccct
caggtcagctggagcaaagacggaactgcgatcaaaggagacaaaatcatcatgaacaga
caagagcacgagatcagatatgtcagcatcctcactttggtgcgggtgaggccggagcag
aggggcttctacactgcccgggtcaccaatggtgatgacaccaaggatgtgagttttgac
ctggaagtccaagttccctctcagattaaagatttgacggaccaccaccttcccgggaag
agacaccttgtgacctgtgtcgctgagggggtcccgaccccgaccatccaatggtacagc
tgcgacagcatgctccagtgcaacaacaacactacgatttggcaacggctggtaccaaaa
gcagaggtgctgagcatccagaccaacgtcagccacagcgagagccgtcaaaccagtcgg
gtgtggagccgtctaaccttccacaagccgcagcaggtcacagtccgctgtgagaccagc
aaccaggcggggagagtggaccgaagagatgtcaaactggtctctagcaccttcttctcg
caggtggccgtgttggcggcggtcctcgccttagtggtgatcatcatcctagccatcatc
atcctcatcgcagtgtggaggaagaaacctcgctacgagatccgctggaaggtcatcgag
tcagtgagccaggatggtcacgagtacatctacgtggaccccatccacttgccttatgac
ctcacctgggagatgcccagagacaacctggttctaggtcgcactctcggatcgggagct
ttcggcagggtggtcgaagcgactgcgtacggtctctcgcattcccagtccagcacaaaa
gtggctgtcaaaatgctgaaatcgacggccagaaggagcgagactcaagctctcatgtca
gagttgaagattatgagtcacctgggtcctcatctcaatgtcgtcaatttactgggtgcc
tgcaccaagcatggtcctctgtacctggtgaccgagtattgtcgctacggcgacttggta
gactacctgcacaggaacaagtacaccttcttgcagtattttgccgagaagaaccaagac
gaaggctgcgtgatctcaaggggaagcacgccgctcagtcaaaggaaaggctacgtgtca
ttcggaagcgagagcgacggagggtacatggacatgagcaaagatgagccctgtgtctac
gttcccatgctagagcagatggactccatcaagtacgccgacatccagccatcgccatac
gagtccacataccaacaggacctgtaccaggaacaagctggcagtagactggacctggtc
atcagtgactcatccacactcacctacgatgacctgctgggtttcagctaccaagtggcc
aagggcatggagttcctggcttccaagaattgcgttcatcgtgacctcgccgcccggaac
gtgttgatctgtgagggaaaactggtgaagatctgtgactttggactggccagagacatc
atgcatgactccaactacatctcgaaaggcagcaccttcctgcccctcaagtggatggca
ccggaaagtattttccacaatctgtacacaaccttgagcgatgtgtggtcctatggtatt
cttctctgggagattttcacactgggaggaaccccctaccccgaccttcccatgaatgag
atgttttacagcgccctaaagcgagggtacagaatgaccaaacccactcacgcctcagat
ggagtgtatgagatcatgaagaagtgctgggacgagaagtttgagaagagacccgagttc
tccttccttgttcacagtatggggaacatgctgactgaaagctataaaaagagatacagc
caagtcaatgacaacttcctgaagagtgaccacccggccgtggcccgcacaaagccacgc
ctctccccccctttctcgacattcagctccccctctgtcgtcgccctccccttccctctg
caacctcgcggtcagggctcaagccaggctcagtcgcaagacgttgtcccttcgtacaac
gactacatcatacccatcccggaccccaagcctgaagacgccttcactgaaatggagtca
gaaagtcctgcaagctccgtggccccggaagaggagacggactccgtttctcaggacaca
gccgagacccttccggaggaggagcggctggaagggaccggcgagagagacgcgctgctg
ggttgcacggggacacccgaggtagaggacagctttctgtag
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