Syngnathoides biaculeatus (alligator pipefish): 133509385
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Entry
133509385 CDS
T09681
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133509385 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133509385 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
133509385 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
TB
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
133509385
NCBI-ProteinID:
XP_061692261
LinkDB
All DBs
Position
12:complement(25263304..25446795)
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AA seq
1568 aa
AA seq
DB search
MKTLQGFGLKKKPEETYFANSYSSGVECLYLLYRRLNKIQSCDKGSSLLEDCGCCPEKHY
QSGVRKLYVLHPGPGSAGANRGDGMRVSSISTRLPKSYSVEMSSQVRTRRMGKQASSTQA
SIVRHGAPEHNQHRQLLKQSGVNVCGGKCCHGWSKAQGSQRCTKPNCIPQCQNGGMCLRP
QLCVCKPGSSGKACELKTVPAHTLPAQPGKGPTNDHRNSHMNGPNAGPQRPIPQQVPPNT
YNLPPPQSDNIAQMKLTVKTSPQLVRPHYIQQHIQQQIRSMPMDHGQHYVIKPKYYHTHN
THTQMHVKPQLERPIPLSVAHNPLHVGNHTGRIKVVFTPTICKFTCVGGRCHNNCQQGNT
TTIISENGHATDTLTAPNFRIVVCHLPCINGGKCSARDKCQCPPSFTGKFCQLPVHNGHH
PHQQTSSSYSQTQVHSTHTLPLTYSNGQNPVFSPNIVNIHIQHPPEASVEVHQVSQLDNH
QNNGQNQRGPQLGSSSSSSYSFHHTESRQKVHNHGYNIVYAGQHGDQIMQYQPISSKSTL
GRCFQETVGSQCGKALPGLTKQEQCCGTIGTSWGFHKCHKCPNKQFIPLIDCPQGYKKIN
STHCQDFDECQLEGVCSNGNCLNTVGSYRCICKSGYIPDPILTTCILRTIPAVIANMPAN
QEEKGACFRLVSSGRQCLHPVSAQLSKQLCCCSVGKAWGPHCDKCPPPGTAMFKEICPGG
MGYTVLPNPPANKPVTVDQTPNDPLTPLPLPTPEKTVVAFGKPEEIIPATIAPDQELVVP
VVSNKPVVDSILPQLSPGVSTVKINAAYPEVVEQSSPPVPLEIFPPNAGQDVAPTQSAEV
DECQINPYICGQGLCYNTAGGYTCHCDEGYRLNHAQTSCVDFDDCLETPSLCSGGLCQNT
EGSFLCVCPQGFLVDEERTTCVDINECANRTVCSSGICINIPGGYNCGSCPAGFSPQGGQ
CVDIDECQDQSVCTRGHCINTDGSFVCQCGPGFSVSLSGYQCDDVDECLEENEPCKSVGE
CVNNVGSYTCTCPQGYRQIDSTSCTDVDECVDEPELCEPHGECFNTEGSYLCVCGSGFTA
SLDTPSCDDIDECGANETLCSPHGLCENRLGSFSCLCDQGYQESQDRQSCMDVNECELLS
SVCGEAQCMNADGSFLCTCPNGQEYDVMVARCKPIPTVSPVERKECYFHLSDENLCESVL
TSHVTLQECCCTLGAGWGDNCEVYPCPVNGTDQFKQMCPSGKGFIPSGELLYDVPTAQSY
KNADECTLFGQEVCKGGFCQDAVGSYECYCKTGQDYDPVKLECRDINECADESVCVGAQC
LNTEGSYICFCNHPMVLDPNRNRCIFVPDVADQHGVGQVDFQGICWQKVTETMTCTLPMG
PDRKTTFTECCCLFGEAWGMECALCPPKNTGDYASMCNLGGRHPYGRDALVAGPVHEYEV
SPDYSPSPEEHPALPFYDNVEYPFKAFEGLRSEECGILNGCDNGRCVRVQEGYTCECFDG
YTLDLPRMACIDVNECSELNDHMSLCKNAKCINTLGSYHCQCLPGFTPSEKANYCVETAT
HQTSAHTQ
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgctccagggttttgggttgaagaagaagccagaagagacgtattttgcaaac
agctacagcagcggagtcgagtgtctttacctcttgtaccgcaggctcaacaagatccag
agttgtgacaaaggatcttccttacttgaggactgtggatgctgtcctgaaaagcactac
cagagcggcgtcaggaagctatacgtgctccaccccggtccgggctcggcgggagcaaac
cgaggagatgggatgcgagtcagctccatttcaacgcggcttccgaaatcttacagcgtc
gaaatgagcagtcaggtccggacacgccggatggggaagcaagcctcgtccactcaggcg
tctattgttcggcacggagctccagaacacaaccagcacaggcagcttctcaagcagtct
ggagtgaatgtctgcggaggcaagtgctgtcatggatggagtaaagctcaaggatcccag
aggtgcacaaagcctaactgcatccctcagtgccaaaacggtggaatgtgcctgaggcct
cagctctgtgtctgcaagcctggctcaagcgggaaggcatgtgagctgaagactgtgccc
gcacacacccttccagcacagcctggtaaaggaccaaccaatgatcacaggaacagtcac
atgaatggaccgaacgcaggaccacagcgtcccatacctcagcaagtgcctcctaatact
tataatctgcccccacctcaaagtgacaacattgcccagatgaaactgactgtcaaaact
tccccacagcttgtgagaccacattatatccaacaacacatccagcaacaaatccggtct
atgcctatggaccatggccagcattatgtcataaagccaaaatattaccatacacacaac
actcacacacagatgcacgtcaaacctcaacttgaaaggcccatccctctatcagtggca
cacaaccctttacatgtgggtaaccacacgggaaggatcaaggtggtgtttacgcccact
atctgcaaatttacctgtgtgggaggaagatgtcacaacaactgccagcagggaaataca
acaaccatcatcagtgaaaatggccatgccactgacaccctgacagcacccaacttcaga
atagtggtgtgccatctgccctgtattaatggtggcaagtgcagtgccagggataaatgt
cagtgccctccaagtttcactggaaagttctgccagttaccagttcataatggacaccac
ccacaccagcagacatcaagcagctacagtcaaactcaggtccattccactcacaccttg
cctttgacctacagcaatgggcagaatcctgtatttagtcccaacattgtaaacatccac
atccaacatcctcctgaggcatctgttgaggtccaccaagtatctcagctggacaaccac
cagaataatggacaaaatcaaagaggtccccagttaggatcctcttcatcctccagctac
agctttcatcacactgaaagccgtcagaaggtccacaaccatggctacaacattgtctat
gcaggccagcatggcgaccagattatgcagtaccagcctatctcttctaagagcacgttg
ggccgctgcttccaagaaacagttggtagtcagtgtgggaaagctctgccgggtctgacc
aaacaggaacagtgctgtggaaccattgggacatcatggggtttccacaaatgccacaaa
tgtccaaacaaacaatttattcctctgatcgactgccctcagggttacaagaaaatcaac
agcactcattgccaagattttgatgagtgccaactggagggcgtgtgttcaaatggaaat
tgtttgaatactgtgggcagttatagatgcatctgcaaatctggctacatccccgacccc
atactcaccacatgcatattgagaacaattccagctgtcattgccaacatgcctgccaac
caagaggagaagggggcttgcttccgtttggtgagctcagggcggcagtgtttgcaccca
gtgtctgctcagctgagcaaacagctctgctgctgcagtgtgggcaaagcttggggacct
cattgtgacaaatgtccccctccaggaacagccatgttcaaagaaatttgccctggtggg
atgggctacactgttctcccaaatccacctgccaataaaccagttacagttgaccagaca
cccaatgatcctcttacacccctccctttaccaacaccagaaaaaacagtggtggctttt
gggaaaccagaagagatcataccagcaaccattgccccagatcaggagctggtagtacct
gtggttagtaataagccagtcgttgattccatactaccccaactatctcctggtgtatcc
actgtcaagatcaatgcagcttacccagaggttgttgagcagagttctccccctgttcca
ctggagattttcccccctaatgcaggacaagatgttgcgccaactcagtctgcagaggtg
gatgagtgccagatcaacccttatatttgtggtcaagggctttgttacaacacagctgga
ggctacacatgccattgtgatgagggataccgcttgaatcatgcacaaacttcctgtgta
gatttcgatgactgtttggagaccccatctttgtgctccggtggtctgtgccaaaacact
gagggtagtttcctgtgtgtgtgtccacaaggattccttgttgatgaagagcgaaccact
tgtgtggatatcaatgaatgtgcaaacaggacagtgtgttcatctggcatttgcattaac
attcctgggggttacaactgtggctcttgccctgctgggttctcaccacagggaggccag
tgtgtagatatagatgagtgccaggatcagagtgtctgcaccaggggccactgcatcaac
actgacggttcctttgtttgtcaatgtgggccaggcttcagcgtgtctctatcgggttac
cagtgtgacgatgtggatgaatgtttggaagaaaacgagccttgcaagtctgtaggggag
tgcgttaacaacgtgggatcctacacgtgtacttgtccccaagggtaccgacagatcgac
agcaccagctgcacagatgttgatgagtgtgtagatgagccagaactctgcgaaccccat
ggtgaatgtttcaacacagagggatcctatctgtgtgtgtgtgggagtggattcactgcc
agtcttgacacaccctcctgtgatgatattgatgagtgtggagccaatgagactttgtgt
agtcctcatggtttatgtgagaatagattgggttcattcagttgcctctgtgaccagggc
taccaagaaagccaagataggcaaagctgtatggatgttaatgagtgtgagctcctgagt
agtgtttgtggagaagctcagtgcatgaacgccgatggttccttcctttgcacgtgtccg
aatggccaagagtatgatgtcatggtcgccagatgtaagcctattccaacagtgtcacca
gtcgagcgtaaagagtgttacttccatttaagtgatgagaacttgtgtgaaagtgtcctc
accagccacgtcaccctgcaagagtgttgctgcacactgggagctggctggggtgacaac
tgtgaggtttatccttgtcctgtcaatggcacagaccagttcaagcagatgtgtccatct
ggaaaaggatttatcccaagtggagagttgctttacgacgtcccaacagctcagagctac
aaaaatgcagatgagtgcactctgttcggccaggaggtgtgtaaaggaggcttctgtcag
gacgctgtggggagctatgagtgttactgcaagacaggacaggactatgaccctgtcaaa
ctggagtgtcgagatataaatgagtgcgccgacgagtcagtgtgtgttggagcacagtgt
ttgaacactgaagggtcatatatttgtttctgtaatcatcccatggtgttggaccccaac
aggaacagatgcatctttgttcctgatgtggctgaccaacatggggtgggtcaggtcgac
tttcagggtatctgctggcagaaggtgacagaaaccatgacgtgcacactcccaatgggt
cccgacaggaagacgacattcacagagtgctgttgtctctttggagaggcgtggggcatg
gaatgtgccctttgcccacccaaaaacacaggtgattatgcatccatgtgtaaccttggc
gggcgtcatccttacggccgtgatgcccttgtcgctggtccagtccatgagtatgaagtg
agcccagactactcaccatcgcccgaggagcatcctgccttgccattttacgacaacgtg
gaatatccattcaaggcgtttgagggtttgcgatcagaggagtgcgggatcttgaatggc
tgtgataacggccggtgtgttcgagtccaagagggttacacatgtgagtgctttgatggc
tacacgctggacctgccccgcatggcctgcattgatgtaaatgagtgttcagaactcaac
gatcacatgtcgctgtgtaaaaatgcaaaatgcatcaacacattgggttcctatcattgt
caatgccttccaggcttcaccccctctgaaaaagcaaactattgtgtggagacagcgaca
caccaaacgtcagcacacacacagtga
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integrated database retrieval system
