Syngnathoides biaculeatus (alligator pipefish): 133510438
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Entry
133510438 CDS
T09681
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133510438 (tcf3a)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
133510438 (tcf3a)
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GFIT
Motif
Pfam:
HLH
DUF7939
Motif
Other DBs
NCBI-GeneID:
133510438
NCBI-ProteinID:
XP_061694312
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All DBs
Position
13:11492092..11527693
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AA seq
619 aa
AA seq
DB search
MTTVGTDKELSDLLDFSAMFELPVSNGKNRATVRLASSQFGGSGIDERNGSSPWGSGEQN
SPSSFSQGRCFGEEAVYNDQAGVSPGTVFGTGIAGKAERAPYSPFATQPGFLPSEIAMPS
PDALSPSGLKTTSQFYPSYEGNNPRRRPAQDPIEAQPKKIRKVPRGLPSSVCASAEDFNR
DNATYSASKAGGIYTPPFSMQEGLHPPSDSWGSAGSMVQPGYPSMLGNSTHLSQHGPFTA
INPQDRLKRQPLPLSPQNYPLHGSEVNGTHPAGFHSGSNSYGIPNHTSPLSANRGTVPGS
SGDEIGKALASIYPSDPNSNGYSSSPSTPSGSPQAASGAISQWTRSSGQATPSPNFHGGI
HGMSNKLEDRLDEAIHVLQRHASGQGGPGLAEMQSLLASGLGLSSAFSSTALGLTSRLPG
MGSSHHEDSAGLPSNGGLGHHSSSTLQGSQPEGFTSMVSSLNRSSDIKRETREEDENCSM
TDKSEDENKELKALQTSLIDEDEDEDLPVEIKAGREKVRRMANNARERLRVRDINEAFKE
LGRMCQLHLNYEKPQTKLNVLQQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSGMDP
QMQMGGGLGGDGHNPISHM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtggggacagacaaggagctcagcgacttgctggattttagcgcgatgttc
gaacttccagtttcaaatggcaagaatagggcaacagtcagactggccagcagtcagttt
gggggctcaggcattgatgagaggaacgggtccagtccttggggatcaggagagcagaac
agtccatcatcgttcagccaggggaggtgtttcggagaagaagctgtttacaatgaccaa
gctggcgtttcacctgggacagtgtttggtacagggattgctgggaaggctgagagagcc
ccatactcaccatttgcaacacagccggggtttctgcccagtgagatagccatgccaagt
cctgatgccctgtccccctctggtttgaagaccacctcccagttttatccctcgtatgaa
ggcaacaaccctcggagacgacccgcacaagaccccatcgaagcccagccaaaaaagatc
cggaaggtgccccgcggcctgccctcctcggtttgtgcctcagccgaggattttaacagg
gacaatgctacatactctgcttccaaagcaggaggcatttacacgcccccattctccatg
caagaaggcctccacccgccttccgattcatggggttctgctgggtcgatggttcaacct
ggttatccttccatgctgggtaactccacccatctgagccaacatggtccctttactgct
atcaacccccaagacagactgaaacggcaaccgttgcccctctcaccacaaaactacccc
ttgcatggcagtgaggtgaacgggacccatcctgctggcttccactctggctcaaacagc
tacggaatccccaatcacacatcccctctttctgccaatcggggaacagtacctggaagt
tctggtgatgaaattggaaaagcacttgcttctatttatccttcagacccaaacagtaat
ggctactcttcatccccatcaacaccctccggctctcctcaggctgcatcaggagctatc
tcccagtggacaaggtcatctggacaggctactccctcacctaactttcatggtgggata
cacggcatgtctaataaactggaggaccgcctggacgaagctattcatgttcttcagcga
cacgctagtggacaaggaggacctggactggctgagatgcagagtctgctggcatctggc
ttgggcttatcttcagcttttagcagcacagcgcttggactcaccagtcgcctgcctgga
atgggctccagtcaccatgaagactctgctggcctgccctctaatggaggacttgggcat
cacagttcatctaccttgcagggctcacagcctgaaggtttcacaagtatggtgagcagc
cttaatcgttccagtgacatcaaacgagagactagggaggaggatgaaaactgctccatg
actgacaagtcagaggatgagaacaaagagctgaaggctcttcaaacaagtctgattgat
gaggacgaagatgaagatctaccagtggagattaaagctgggcgggagaaagtgcggagg
atggcaaacaatgcccgcgagcggcttcgcgtgcgggacatcaatgaggcctttaaggag
ctgggccgcatgtgtcagctccatctgaactatgagaaaccgcagactaaattgaacgtg
ctccaacaggccgttaacgttatactcaacctggagcagcaagtccgagagcgtaatctc
aacccaaaggccgcctgcctcaagagaagagaggaggagaaagtgtcgggcatggacccc
cagatgcagatgggcggaggtctcggaggtgatggacacaaccctataagccatatgtaa
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