Syngnathoides biaculeatus (alligator pipefish): 133513139
Help
Entry
133513139 CDS
T09681
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04620
Toll-like receptor signaling pathway
sbia04621
NOD-like receptor signaling pathway
sbia04622
RIG-I-like receptor signaling pathway
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133513139 (traf3)
04621 NOD-like receptor signaling pathway
133513139 (traf3)
04622 RIG-I-like receptor signaling pathway
133513139 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133513139 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_4
RING_XB3-XBAT31
Fzo_mitofusin
zf-TRAF_2
Sina_ZnF
zf-RING_2
zf-RING_5
GAS
ATG16
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
133513139
NCBI-ProteinID:
XP_061699550
LinkDB
All DBs
Position
15:complement(25430228..25437193)
Genome browser
AA seq
591 aa
AA seq
DB search
MSAGRSVDGREVQLALQQAAPSLVPPLSAAPPAVPAPNRPANPWPPSDVSQGAAAGFLPQ
DGGFTDRFVDVPEEKYRCESCRLVLCQPRQTECGHRFCQSCIARILSRPNPVCPADAEAL
FSNKIFRDVCCHREILALKVYCRAEARGCRERTSLQQMPEHLNVCPFFEVPCPLGKCKER
MMRKDIPEHLARKCKHRETACDFCLAKMPLADLQKHKETVCPAFPVSCPNLCSFSSLPRS
ELPSHQHECPKAQVSCPFQRYGCAYKALSPEVRQHEAACAAEHLRMMMLKNVSLESKVDE
VKAELLDKCKSVPLVTSRLCEAEKHNGELRDKHRHVEQKVASMQKVMSAHSEKLLEAELE
LRSLASLRDELDKVRLSLDAVRGRLGALEQGGRSGAGTLTLASLETQQNRQGDMLSVHDI
RLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCAR
VYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPN
SSSFRRPAAEMNIASGCPLFVSQSVLESASYIKDDTIFIKVTVDTSDLPDP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggacgcagcgtcgacgggagggaggtgcaactggccctccagcaggcggcg
ccctccctcgtcccgcccctgtccgcggcgcctcccgctgtccccgccccgaaccggccg
gccaatccctggcctccgagcgacgtttcgcaaggtgcggcggcgggcttcctgccgcag
gacggcggcttcacggatcgcttcgtggacgtccccgaggagaaatatcgctgcgagtcg
tgccggctggtcctgtgtcagccccggcagaccgagtgcggccatcgcttctgccagagc
tgcattgcgcgcatactcagccgtcccaacccggtgtgtccggccgacgccgaagcgctc
ttcagcaacaagatattccgggacgtttgctgccatcgggaaatcctggcgctgaaggtg
tactgtcgggccgaagccagaggctgccgggagcggaccagcctgcagcagatgcccgag
cacctgaacgtgtgccccttcttcgaggtgccgtgcccactgggcaagtgcaaggagagg
atgatgaggaaggacatccccgagcacctcgcccgcaagtgcaaacatcgagagaccgcc
tgcgacttttgcctggccaagatgccgctcgccgacctgcagaagcacaaggagacggtg
tgtcccgccttcccggtgtcgtgcccaaacctttgctccttctcatcgctgccccggagc
gagctgcccagtcaccagcacgagtgtcctaaagctcaggtcagctgccccttccagcgc
tacggctgcgcctacaaggcgctgagcccggaggtccgccaacacgaggccgcttgcgcc
gccgagcacctgaggatgatgatgctgaagaacgtctccttggagagcaaggtggacgag
gtgaaggccgagctgctggacaagtgcaaatcggttccgctggtcacttcccgtctctgc
gaggctgagaagcacaacggcgagctgagggacaagcacagacacgtggagcagaaggtg
gcgtccatgcagaaggtgatgagcgctcactccgagaagcttctggaggcggagctggag
cttcggtctctggcgtcgctgcgggacgagctggacaaagtccgcctgtcgctggacgcc
gtccgcggcaggctgggcgccctggagcaagggggccgctccggagcggggacgctcacc
ctggcctcgctggagacgcagcagaaccgccagggcgacatgctgagcgtccacgacatc
cggctggccgacatggacctgcgcttccaggttctggagacggccagctacaacggaacc
ctcatctggaagatccgcgactacaagcggcggaaacaggaagcggtggcggccaagacg
ctttcgctgtactcgcagcccttctacacgggatacttcggctacaagatgtgcgcccgc
gtctacctgaacggagacggcatgggcaagggcacgcacctgtcgctcttcttcgtggtc
atgcgcggcgagtacgacgccctcctgccgtggccctttaaacagaaggtgacgctgatg
ctgatggaccagggtccggcccgcaagcacctgggcgacgccttcaagccggaccccaac
agcagcagcttccgccgtcccgccgcggagatgaacatcgcctccgggtgtccgctgttc
gtctcgcagagcgtgctggagtcggccagctacatcaaggacgacaccatcttcatcaag
gttaccgtggatacttctgacctccctgatccgtga
DBGET
integrated database retrieval system
