KEGG   Syngnathoides biaculeatus (alligator pipefish): 133514858
Entry
133514858         CDS       T09681                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03420  Nucleotide excision repair
sbia04110  Cell cycle
sbia04114  Oocyte meiosis
sbia04120  Ubiquitin mediated proteolysis
sbia04141  Protein processing in endoplasmic reticulum
sbia04310  Wnt signaling pathway
sbia04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133514858 (rbx1)
   04120 Ubiquitin mediated proteolysis
    133514858 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    133514858 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    133514858 (rbx1)
   04350 TGF-beta signaling pathway
    133514858 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    133514858 (rbx1)
   04114 Oocyte meiosis
    133514858 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbia04121]
    133514858 (rbx1)
   03400 DNA repair and recombination proteins [BR:sbia03400]
    133514858 (rbx1)
Enzymes [BR:sbia01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     133514858 (rbx1)
Ubiquitin system [BR:sbia04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   133514858 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     133514858 (rbx1)
   Cul2 complex
     133514858 (rbx1)
   Cul3 complex
     133514858 (rbx1)
   Cul4 complex
     133514858 (rbx1)
   Cul7 complex
     133514858 (rbx1)
   Cul8 complex
     133514858 (rbx1)
   Cul9 complex
     133514858 (rbx1)
DNA repair and recombination proteins [BR:sbia03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      133514858 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      133514858 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 133514858
NCBI-ProteinID: XP_061702885
LinkDB
Position
16:12665713..12667761
AA seq 108 aa
MAAAMDVDAPSCSSSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagcgatggacgtagatgcacccagctgctccagtagtggagcaagcaagaag
cgatttgaagtcaagaagtggaatgctgtggcactttgggcttgggacattgttgtggac
aactgtgctatatgtcgaaaccacatcatggatctttgtatagagtgccaggccaaccaa
gcttcggcgacgtctgaggagtgcacagtagcctggggtgtctgcaatcacgccttccac
ttccactgtatttcccgctggctcaagaccagacaggtgtgcccacttgacaaccgagag
tgggagttccaaaagtatggccactag

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