Syngnathoides biaculeatus (alligator pipefish): 133515121
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Entry
133515121 CDS
T09681
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133515121 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133515121 (smcr8a)
Membrane trafficking [BR:
sbia04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
133515121 (smcr8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
133515121
NCBI-ProteinID:
XP_061703409
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All DBs
Position
16:complement(15133051..15141494)
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AA seq
896 aa
AA seq
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MIGSPDVVAFTKEDDDGQTTPDPWAIPEEFSVPLHPPADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPTVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISVDERKIMLQFQELSAYFSKASEC
LKAGNRKAFAKELQRKLRDLEYTHSVLQREEGLQREAGPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYPHRPRRDPHAVACQKCMSECEELFVKYSKLAKPLSCSNGGEKEGDD
VQGRNGHGSEREVGDDEDEHVKRRPSYTPQLIKAKSAKCFDKRLKTLQELCDNTFYEATV
ELLKETERSFRGDLCYLHTRRLDLSLRKKLRVINFLFEEELCEDDYEDLDGRGTLRPFCA
VNHAVDDSKRLHPVPILLGSEHPKPFDAASETNHTRDLNLEDNNLKTSYFDQQLDAKKRS
EKPNGNCSSQTCLKPDFPDQESDLTPDCIYKTYLNGESNSEWVEAASVEDRRPKTLLQES
TRDEGCEKDSKFVPMDAACCMTHEGLLNNPPDVAPHLAVHRQNAQILVVNQEPQALLPLQ
DDYAVGSPFSENHIAGLPGDAGSHTSAEDGSDCTMSTSTGSDWTASPLSNGGKVTLRQKK
KAGQGALRFVRQYPFAMQALWCLLGGRTLVVLGTDETRVRRLVSALALFVPAPGKCGERV
QAWLCSPFTLTDLYSWKLIGLQRLASPVGSSMLHSLSRYSRYISILDVDQKTLRCPPYRG
ELLTNMADHRTYVRRGSTYFLHVQSILCRLVAKAFLFTFTHHLHLPVNITEGPEGVEARR
RCFLQEQLGLGEDDSQIVLYLSQLITLHYLHSSDGRSAAAAAPFNFNYTTSVLYKI
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgataggttcacctgacgtggtggctttcacaaaagaggatgacgatggtcagaccacg
cctgacccgtgggccattccagaggagttctccgttcccctccatcctccagctgactcc
aacccttgggccaaaacctcctatgccaagttcactaaagacttcatcctcatttcggag
ttctctgagcaggtgggcccccagcctctcctcaccattcccgatgaccccacagtctgt
ggcaccttcgatctcaactacttctccctacgcatcatgtcggttgactaccaggcctcc
ttcgttgggcacccccctggtagcggataccctcggctcagttttgtggaggactcaagg
gttgtactgggtgactcgaaagagggcgcgtttgcctacgtccatcaccttacactctac
gacctagaggcgagaggctttgtgcggccattctgtatggcatacatttcagtagatgaa
aggaagatcatgttacaatttcaggaactgtctgcctacttctcaaaagcctcggagtgc
ctgaaggctgggaaccgcaaagcttttgccaaagaacttcagcgaaagcttcgagatcta
gagtacactcactctgttctgcagagggaagaagggctgcagagagaggcgggaccacaa
tgcatgtactccgctcatgctgtggaaaaggcaaatgagctcgccaatgtggaaaagagc
atatacgaacacagagaccttctaaggcagatcagctcatacccccatcgtccccgccga
gaccctcacgccgttgcatgtcagaagtgtatgagtgagtgtgaggagctctttgtcaag
tattccaagctagctaaacccttgagttgttccaatggtggggagaaagaaggggatgat
gttcagggacgtaacggtcacggaagcgaaagggaggtgggtgacgatgaagatgagcat
gtcaaacgcaggccgtcctacacgccgcagttgatcaaagcgaagtctgcaaagtgtttt
gacaagcgcctcaagaccctccaagaactttgtgacaacacgttctacgaggccactgtg
gagctcctgaaggaaacagaaaggagtttccgtggtgacctgtgctacctgcacacccga
cgcttggacctatccctacggaagaagctgagagttattaacttcctctttgaggaggaa
ctatgtgaagacgactatgaggatcttgatggaaggggaacattaagaccattttgtgct
gtgaatcacgctgtggacgactccaaacgtttgcatccagtccctatcttacttggatca
gaacatccaaagccttttgatgctgcctctgagaccaaccatactcgagacctcaacctt
gaagacaacaatctcaagacctcttattttgaccaacaactggatgccaagaagcgctca
gagaaacctaatggaaactgtagcagccaaacatgtctaaaaccagactttccggatcaa
gagtctgacttgaccccagactgcatctacaaaacgtatctaaatggtgagagcaacagt
gaatgggtagaggccgctagtgttgaagaccggagacccaagactttgctacaagaatct
accagagatgaaggatgcgagaaggactccaagtttgttccaatggatgccgcatgctgt
atgactcatgaaggtttactcaataatccacctgatgtggcgccccatctcgctgtccat
cgtcagaatgctcaaatcctggtggtcaaccaggagccccaggccctacttccactccag
gatgactatgctgtgggatccccattctcagagaaccacatagctggactcccaggagat
gcaggttcccatacctctgctgaagatggctctgattgtactatgagtacatctactggt
tctgactggactgcctctcctctaagcaatggggggaaggtgaccctgcgtcagaagaag
aaggctggacaaggggccttgaggttcgtgcgacagtatcctttcgctatgcaggctctc
tggtgtttgctaggtggcaggaccctggtggtgcttgggaccgatgagacgagagttcgt
cggctggtttcagctctggccctgtttgtaccagctccggggaagtgtggtgagcgagta
caagcttggctgtgctcccctttcaccctcactgacctgtacagttggaaacttattgga
ttgcagagattggcgtctcctgttggttccagcatgctgcactcattgtcccgctacagc
cgctacatttccattctggatgtcgaccagaagaccttgcgctgtccaccttatcgtggc
gaactcctcaccaacatggccgatcaccgcacatacgtccgccgtggctccacgtacttc
cttcacgtgcagagtatactgtgtcgtctggtggccaaggcctttctgttcaccttcacc
catcatctccacctgccggtcaacataacagaggggccggagggcgtggaggcccgacgc
cgctgcttcctccaggagcaattggggctgggagaggacgacagccagatagtgctctac
ctcagccagctgatcactctgcactacctgcacagttctgacggccgcagtgcagcagca
gcagcgccttttaattttaactacaccaccagcgttttatacaaaatttga
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