Syngnathoides biaculeatus (alligator pipefish): 133515266
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Entry
133515266 CDS
T09681
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04137
Mitophagy - animal
sbia04141
Protein processing in endoplasmic reticulum
sbia04210
Apoptosis
sbia04217
Necroptosis
sbia04621
NOD-like receptor signaling pathway
sbia04622
RIG-I-like receptor signaling pathway
sbia04920
Adipocytokine signaling pathway
sbia05132
Salmonella infection
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133515266 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133515266 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133515266 (traf2b)
09143 Cell growth and death
04210 Apoptosis
133515266 (traf2b)
04217 Necroptosis
133515266 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133515266 (traf2b)
04622 RIG-I-like receptor signaling pathway
133515266 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
133515266 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133515266 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
133515266 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133515266 (traf2b)
04121 Ubiquitin system [BR:
sbia04121
]
133515266 (traf2b)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133515266 (traf2b)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133515266 (traf2b)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
133515266 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_6
ATG16
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
133515266
NCBI-ProteinID:
XP_061703629
LinkDB
All DBs
Position
17:complement(18226743..18241671)
Genome browser
AA seq
514 aa
AA seq
DB search
MARVWLESVNSLPGIPHSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACRQEKIYEEPTSILNISEAFPDNAAGREIASLPAQCLNEGCSWKGSIKEYETQ
HEGSCELERVQCEACQGFLLRSEMERHNERECEARTLNCKYCKVPCNFKDIKAHDEVCLK
FPLQCKDCGKKKIPREKFNDHVRSCAKSKSACPFSEVGCKFVLDNGKLSDHEHSSVMEHL
RMLLPLVLSVARPATEAPVHTEWQEDSGLGLYRAPEEGASSPVLTSDMDKKVSALENIVC
VLNREVERSSVTVEAFSHQHRLDQDQLESLNTKVQQLERALAMRDLQLSETEQLLRELQF
CTYDGVFVWKISDFARRRVDAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHL
SLFFVVMRGRCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPVGEMNIAS
GCPLFCPLGKLAGKSPYLRDNTIFIKAIVDLTGL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagtgtggttggagagcgtcaactctttaccagggattccccacagcgtgctg
tcagtgcccatggagaataagtacaaatgtcagcagtgtctccaggtcctcaggaagccc
gtccaggctcagtgcggccaccgcttctgcgtacactgcttcaaacagctcaccagttcg
ggtccgaagccatgcgaggcctgccgccaggagaagatttatgaggagcccacgtccatc
ctcaacatcagtgaggccttcccggacaatgcggccggtcgagaaatagccagccttcct
gcgcagtgtttgaacgagggttgcagctggaaaggatccatcaaagaatacgagacgcag
catgaaggctcctgcgagctggagcgcgtgcagtgcgaggcctgccagggcttcttgctg
cgctcggagatggagcgccacaacgagagggagtgcgaggcccgaacgctcaactgtaaa
tactgcaaagtgccgtgcaactttaaagacatcaaggcgcatgacgaagtgtgcctcaag
tttcccttgcagtgcaaagactgcggcaaaaagaagatccccagagaaaagttcaacgat
cacgttcgatcctgtgccaagtccaagagcgcctgcccctttagcgaagtcggctgcaag
tttgtgctggacaacggcaagttgagcgaccacgagcacagcagcgtcatggagcacctg
cgcatgctgctgcccctggtgctgtcggtggcccggcccgccacagaggccccggtccac
accgagtggcaggaagactccggtctgggcctgtacagggctcctgaggagggagcctcg
tcccccgtgctgacttcagacatggacaagaaggtgagcgccttggaaaacatcgtgtgc
gtcctgaaccgcgaggtggagcgcagctctgtgacggtggaggccttctcgcaccagcac
cgcctggaccaggaccagctggagagcctgaacaccaaggttcagcagctggagcgggcc
ttggccatgcgcgacctgcagctgtccgagacggagcagctgctgcgagagctgcagttc
tgcacctacgacggcgtctttgtctggaagatctcggactttgcgcgccgcagggtcgac
gccgtggcgggtcggacgcctgccatgttctcacccgcgttctactccagcaaatacggc
tacaaaatgtgcctgcgcttgtacctgaacggcgacggcacggggcggggtacgcacctg
tcgctcttctttgtggtcatgcggggccgctgcgacgcgctgctcaagtggcccttcagc
cagaaggtgacgctgatgctgctggaccagaacaaccgcgagcacataatcgacgccttc
cgcccggacgtcacttccacgtccttccagcggcccgtgggcgagatgaacatcgccagc
ggctgcccgctcttctgcccgctggggaagctggccgggaagagtccgtacctgcgcgac
aacaccatcttcatcaaggccatcgtggacctgacgggcctgtga
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integrated database retrieval system