KEGG   Syngnathoides biaculeatus (alligator pipefish): 133515266
Entry
133515266         CDS       T09681                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010  MAPK signaling pathway
sbia04137  Mitophagy - animal
sbia04141  Protein processing in endoplasmic reticulum
sbia04210  Apoptosis
sbia04217  Necroptosis
sbia04621  NOD-like receptor signaling pathway
sbia04622  RIG-I-like receptor signaling pathway
sbia04920  Adipocytokine signaling pathway
sbia05132  Salmonella infection
sbia05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133515266 (traf2b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    133515266 (traf2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    133515266 (traf2b)
  09143 Cell growth and death
   04210 Apoptosis
    133515266 (traf2b)
   04217 Necroptosis
    133515266 (traf2b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    133515266 (traf2b)
   04622 RIG-I-like receptor signaling pathway
    133515266 (traf2b)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    133515266 (traf2b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    133515266 (traf2b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133515266 (traf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbia03019]
    133515266 (traf2b)
   04121 Ubiquitin system [BR:sbia04121]
    133515266 (traf2b)
Enzymes [BR:sbia01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133515266 (traf2b)
Messenger RNA biogenesis [BR:sbia03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     133515266 (traf2b)
Ubiquitin system [BR:sbia04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    133515266 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-RING_5 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-RING_6 ATG16 zf-C3HC4_5
Other DBs
NCBI-GeneID: 133515266
NCBI-ProteinID: XP_061703629
LinkDB
Position
17:complement(18226743..18241671)
AA seq 514 aa
MARVWLESVNSLPGIPHSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACRQEKIYEEPTSILNISEAFPDNAAGREIASLPAQCLNEGCSWKGSIKEYETQ
HEGSCELERVQCEACQGFLLRSEMERHNERECEARTLNCKYCKVPCNFKDIKAHDEVCLK
FPLQCKDCGKKKIPREKFNDHVRSCAKSKSACPFSEVGCKFVLDNGKLSDHEHSSVMEHL
RMLLPLVLSVARPATEAPVHTEWQEDSGLGLYRAPEEGASSPVLTSDMDKKVSALENIVC
VLNREVERSSVTVEAFSHQHRLDQDQLESLNTKVQQLERALAMRDLQLSETEQLLRELQF
CTYDGVFVWKISDFARRRVDAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHL
SLFFVVMRGRCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPVGEMNIAS
GCPLFCPLGKLAGKSPYLRDNTIFIKAIVDLTGL
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggcacgagtgtggttggagagcgtcaactctttaccagggattccccacagcgtgctg
tcagtgcccatggagaataagtacaaatgtcagcagtgtctccaggtcctcaggaagccc
gtccaggctcagtgcggccaccgcttctgcgtacactgcttcaaacagctcaccagttcg
ggtccgaagccatgcgaggcctgccgccaggagaagatttatgaggagcccacgtccatc
ctcaacatcagtgaggccttcccggacaatgcggccggtcgagaaatagccagccttcct
gcgcagtgtttgaacgagggttgcagctggaaaggatccatcaaagaatacgagacgcag
catgaaggctcctgcgagctggagcgcgtgcagtgcgaggcctgccagggcttcttgctg
cgctcggagatggagcgccacaacgagagggagtgcgaggcccgaacgctcaactgtaaa
tactgcaaagtgccgtgcaactttaaagacatcaaggcgcatgacgaagtgtgcctcaag
tttcccttgcagtgcaaagactgcggcaaaaagaagatccccagagaaaagttcaacgat
cacgttcgatcctgtgccaagtccaagagcgcctgcccctttagcgaagtcggctgcaag
tttgtgctggacaacggcaagttgagcgaccacgagcacagcagcgtcatggagcacctg
cgcatgctgctgcccctggtgctgtcggtggcccggcccgccacagaggccccggtccac
accgagtggcaggaagactccggtctgggcctgtacagggctcctgaggagggagcctcg
tcccccgtgctgacttcagacatggacaagaaggtgagcgccttggaaaacatcgtgtgc
gtcctgaaccgcgaggtggagcgcagctctgtgacggtggaggccttctcgcaccagcac
cgcctggaccaggaccagctggagagcctgaacaccaaggttcagcagctggagcgggcc
ttggccatgcgcgacctgcagctgtccgagacggagcagctgctgcgagagctgcagttc
tgcacctacgacggcgtctttgtctggaagatctcggactttgcgcgccgcagggtcgac
gccgtggcgggtcggacgcctgccatgttctcacccgcgttctactccagcaaatacggc
tacaaaatgtgcctgcgcttgtacctgaacggcgacggcacggggcggggtacgcacctg
tcgctcttctttgtggtcatgcggggccgctgcgacgcgctgctcaagtggcccttcagc
cagaaggtgacgctgatgctgctggaccagaacaaccgcgagcacataatcgacgccttc
cgcccggacgtcacttccacgtccttccagcggcccgtgggcgagatgaacatcgccagc
ggctgcccgctcttctgcccgctggggaagctggccgggaagagtccgtacctgcgcgac
aacaccatcttcatcaaggccatcgtggacctgacgggcctgtga

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